chr4.CM0182.510.nc (Lotus japonicus)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 chr4.CM0182.510.nc T163615_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT

ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.895 0.895
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD

HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.833 0.833
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN

NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0182.510.nc CG-1 21 135

Links

Other CG-1 family TFs
Other Lotus japonicus TFs

Invalid Input OrderBy

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action