chr4.CM0429.140.nd (Lotus japonicus)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 chr4.CM0429.140.nd T163616_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.912 0.912
Q2WEL1_ORYSA
M10406_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBT_01 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0429.140.nd CG-1 31 145

Links

Other CG-1 family TFs
Other Lotus japonicus TFs

Invalid Input OrderBy

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action