CpipJ_CPIJ011213 (Culex pipiens)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 CpipJ_CPIJ011213 T164225_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-28
M03713_2.00 		Drosophila melanogaster
KCGTGTAGGTCGGTGGB
VCCACCGACCTACACGM		 SELEX
Nitta et al.(2015)
lin-28_1 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ011213-RA CSD 24 89

Links

Other CSD family TFs
Other Culex pipiens TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPIJ011213 Culex quinquefasciatus CPIJ011213 I 1.000
AAEL004259 Aedes aegypti AAEL004259 N 0.909
AFUN002605 Anopheles funestus AFUN002605 I 0.833
AFAF013794 Anopheles farauti AFAF013794 I 0.833
BGIBMGA000377 Bombyx mori BGIBMGA000377 I 0.833
ACUA024423 Anopheles culicifacies ACUA024423 I 0.818
MCINX009795 Melitaea cinxia MCINX009795 I 0.818
ASIS012373 Anopheles sinensis ASIS012373 I 0.818
ASTEI02701 Anopheles stephensi ASTEI02701 I 0.818
AALB005062 Anopheles albimanus AALB005062 I 0.818
KGM_16662 Danaus plexippus KGM_16662 I 0.818
ACOM039486 Anopheles coluzzii ACOM039486 I 0.803
AGAP006591 Anopheles gambiae AGAP006591 I 0.803
ADIR007387 Anopheles dirus ADIR007387 I 0.803
AEPI008253 Anopheles epiroticus AEPI008253 I 0.803
AQUA004698 Anopheles quadriannulatus AQUA004698 I 0.803
AMIN007802 Anopheles minimus AMIN007802 I 0.803
AMEC021668 Anopheles melas AMEC021668 I 0.803
AATE020348 Anopheles atroparvus AATE020348 I 0.803
ACHR009791 Anopheles christyi ACHR009791 I 0.803
AARA008465 Anopheles arabiensis AARA008465 I 0.803
HMEL007073 Heliconius melpomene HMEL007073 I 0.803
LLOJ008847 Lutzomyia longipalpis LLOJ008847 I 0.788
TC014742 Tribolium castaneum TC014742 I 0.788
HHAL010561-PA Halyomorpha halys HHAL010561-PA I 0.773
RPRC012403 Rhodnius prolixus RPRC012403 I 0.773
SMAR011791 Strigamia maritima SMAR011791 I 0.773
AMEM002179 Anopheles merus AMEM002179 I 0.758
tetur15g00620 Tetranychus urticae tetur15g00620 I 0.758
LCUP008192 Lucilia cuprina LCUP008192 I 0.758
MDOA004026 Musca domestica MDOA004026 I 0.712
HelroG163427 Helobdella robusta HelroG163427 N 0.712
GA14466 Drosophila pseudoobscura FBgn0074494 I 0.712
lin-28 Drosophila melanogaster FBgn0035626 D 0.712
CGI_10016910 Crassostrea gigas CGI_10016910 N 0.712