Aqu1.220698 (Amphimedon queenslandica)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 Aqu1.220698 T164268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN

NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.758 0.758
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.758 0.758
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.758 0.758
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.758 0.758
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PAC:15719226 CSD 21 90

Links

Other CSD family TFs
Other Amphimedon queenslandica TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CGI_10014112 Crassostrea gigas CGI_10014112 I 0.803
ENSGMOG00000007765 Gadus morhua ENSGMOG00000007765 I 0.788
WUBG_03960 Wuchereria bancrofti WUBG_03960 I 0.788
DME_0000984901 Dracunculus medinensis DME_0000984901 I 0.788
YBX2 Gasterosteus aculeatus ENSGACG00000019392 I 0.788
BGLB002206 Biomphalaria glabrata BGLB002206 I 0.788
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.788
LotgiG78612 Lottia gigantea LotgiG78612 I 0.788
LOAG_17966 Loa loa LOAG_17966 I 0.788
EEL_0000726801 Elaeophora elaphi EEL_0000726801 I 0.788
Ocbimv22002282m.g Octopus bimaculoides Ocbimv22002282m.g I 0.788
nOo.2.0.1.g01690 Onchocerca ochengi nOo.2.0.1.g01690 I 0.788
Bm3781 Brugia malayi Bm3781 I 0.788
ENSORLG00000006269 Oryzias latipes ENSORLG00000006269 I 0.788
nDi.2.2.2.g07679 Dirofilaria immitis nDi.2.2.2.g07679 I 0.788
nLs.2.1.2.g03745 Litomosoides sigmodontis nLs.2.1.2.g03745 I 0.788
nAv.1.0.1.g07732 Acanthocheilonema viteae nAv.1.0.1.g07732 I 0.788
GPUH_0001124501 Gongylonema pulchrum GPUH_0001124501 I 0.788
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.786
ENSCSAVG00000003053 Ciona savignyi ENSCSAVG00000003053 I 0.773
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.773
PHUM156710 Pediculus humanus PHUM156710 I 0.773
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.773
ENSPFOG00000007181 Poecilia formosa ENSPFOG00000007181 I 0.773
ENSXMAG00000015755 Xiphophorus maculatus ENSXMAG00000015755 I 0.773
WBGene00247949 Onchocerca volvulus WBGene00247949 I 0.773
TCNE_0001642201 Toxocara canis TCNE_0001642201 I 0.773
TCLT_0000736301 Thelazia callipaeda TCLT_0000736301 I 0.773
D917_04190 Trichinella nativa D917_04190 I 0.773
EVEC_0000436301 Enterobius vermicularis EVEC_0000436301 I 0.773
ybx3 Xenopus tropicalis XB-GENE-1007558 I 0.773
ALUE_0000394301 Ascaris lumbricoides ALUE_0000394301 I 0.773
ASU_11432 Ascaris suum ASU_11432 I 0.773
ASIM_0001243501 Anisakis simplex ASIM_0001243501 I 0.773
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.758
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.758
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.758
D918_04890 Trichuris suis D918_04890 I 0.758
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.758
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.758
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.758
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.758
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.758
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.758
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.758
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.758
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.758
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.758
TTRE_0000405201 Trichuris trichiura TTRE_0000405201 I 0.758
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.758
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.758
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.758
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.758
YBX3 Sus scrofa ENSSSCG00000000633 I 0.758
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.758
ybx1 Oryzias latipes ENSORLG00000004225 I 0.758
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.758
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.758
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.758
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.758
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.758
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.758
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.758
Aan_R014295 Calypte anna Aan_R014295 I 0.758
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.758
Hsal_07052--XP_393344.3_APIME Harpegnathos saltator Hsal_07052--XP_393344.3_APIME I 0.758
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.758
CAA42778 Xenopus laevis CAA42778 I 0.758
LCUP004743 Lucilia cuprina LCUP004743 I 0.758
AAI30161 Xenopus laevis AAI30161 I 0.758
AAH42217 Xenopus laevis AAH42217 I 0.758
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.758
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.758
ybx2.L Xenopus laevis XB-GENE-6252609 I 0.758
Aan_R001440 Calypte anna Aan_R001440 I 0.758
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.758
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.758
ENSTRUG00000011813 Takifugu rubripes ENSTRUG00000011813 I 0.758
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.758
LDEC002142 Leptinotarsa decemlineata LDEC002142 I 0.758
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.758
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.758
XP_002159745.1 Hydra magnipapillata XP_002159745.1 I 0.758
TriadG64023 Trichoplax adhaerens TriadG64023 I 0.758
Ybx3 Mus musculus ENSMUSG00000030189 I 0.758
ybx1.S Xenopus laevis XB-GENE-865405 I 0.758
NEMVEDRAFT_v1g104083 Nematostella vectensis NEMVEDRAFT_v1g104083 D 0.758
XP_002154000.1 Hydra magnipapillata XP_002154000.1 I 0.758
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.758
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.758
YBX3 Echinops telfairi ENSETEG00000002557 I 0.758
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.758
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.758
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.758
YBX1 Bos taurus ENSBTAG00000017368 I 0.758
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.758
YBX3 Bos taurus ENSBTAG00000009663 I 0.758
YBX3 Homo sapiens ENSG00000060138 I 0.758
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.758
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.758
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.758
YBX1 Gallus gallus ENSGALG00000004848 I 0.758
YBX1 Homo sapiens ENSG00000065978 D 0.758
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.758
CapteG166603 Capitella teleta CapteG166603 I 0.758
YBX1 Canis familiaris ENSCAFG00000002541 I 0.758
ybx1 Danio rerio ENSDARG00000004757 I 0.758
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.758
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.758
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.758
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.758
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.758
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.758
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.758
YBX3 Canis familiaris ENSCAFG00000013401 I 0.758
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.758
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.758
Ybx1 Mus musculus ENSMUSG00000028639 I 0.758
YBX3 Equus caballus ENSECAG00000013777 I 0.758
ENSCING00000010654 Ciona intestinalis ENSCING00000010654 I 0.758
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.758
YBX3 Felis catus ENSFCAG00000027748 I 0.758
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.758
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.758
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.758
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.758
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.758
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.758
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.758
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.758
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.758
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.758
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.758
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.758
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.758
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.758
Tal_R003478 Tyto alba Tal_R003478 I 0.757
CapteG50376 Capitella teleta CapteG50376 I 0.755
Alligator_sinensis_CCG014301.1 Alligator sinensis Alligator_sinensis_CCG014301.1 I 0.744
RPRC001993 Rhodnius prolixus RPRC001993 I 0.742
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.742
PHUM156720 Pediculus humanus PHUM156720 I 0.742
ENSAMEG00000016564 Ailuropoda melanoleuca ENSAMEG00000016564 I 0.742
KGM_01291 Danaus plexippus KGM_01291 I 0.742
ENSMMUG00000022712 Macaca mulatta ENSMMUG00000022712 I 0.742
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.742
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.742
MCINX006244 Melitaea cinxia MCINX006244 I 0.742
YBX2 Equus caballus ENSECAG00000009996 I 0.742
YQE_07192 Dendroctonus ponderosae YQE_07192 I 0.742
ENSP00000007699-D1 Bos grunniens ENSP00000007699-D1 I 0.742
ENSMMUP00000017257 Macaca fascicularis ENSMMUP00000017257 I 0.742
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.742
Ogr10632 Ophisaurus gracilis Ogr10632 I 0.742
ENSNLEG00000008063 Nomascus leucogenys ENSNLEG00000008063 I 0.742
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.742
Ybx2 Mus musculus ENSMUSG00000018554 I 0.742
Alligator_sinensis_CCG005029.1 Alligator sinensis Alligator_sinensis_CCG005029.1 I 0.742
YBX2 Dasypus novemcinctus ENSDNOG00000013746 I 0.742
TC013925 Tribolium castaneum TC013925 I 0.742
HMEL008461 Heliconius melpomene HMEL008461 I 0.742
ENSOARG00000011562 Ovis aries ENSOARG00000011562 I 0.742
ENSCSAG00000011857 Chlorocebus sabaeus ENSCSAG00000011857 I 0.742
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.742
SMU15014702 Schmidtea mediterranea SMU15014702 I 0.742
ENSSSCG00000030357 Sus scrofa ENSSSCG00000030357 I 0.742
YBX2 Sus scrofa ENSSSCG00000017938 I 0.742
ENSSTOG00000008630 Ictidomys tridecemlineatus ENSSTOG00000008630 I 0.742
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.742
ENSAMXG00000007090 Astyanax mexicanus ENSAMXG00000007090 I 0.742
YBX2 Procavia capensis ENSPCAG00000008019 I 0.742
YBX2 Bos taurus ENSBTAG00000009126 I 0.742
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.742
BGIBMGA000526 Bombyx mori BGIBMGA000526 I 0.742
MDOA013639 Musca domestica MDOA013639 I 0.742
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.742
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.742
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.742
YBX2 Callithrix jacchus ENSCJAG00000016581 I 0.742
YBX3 Procavia capensis ENSPCAG00000001397 I 0.742
ENSPSIG00000012364 Pelodiscus sinensis ENSPSIG00000012364 I 0.742
SNAPOd2T00011389001 Oikopleura dioica SNAPOd2T00011389001 I 0.742
ENSCAFG00000016128 Canis familiaris ENSCAFG00000016128 I 0.742
ENSCAFG00000017286 Canis familiaris ENSCAFG00000017286 I 0.742
GB54355 Apis mellifera GB54355 I 0.742
YBX2 Tetraodon nigroviridis ENSTNIG00000010139 I 0.742
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.742
ybx2 Xenopus tropicalis XB-GENE-5798907 I 0.742
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.742
YBX2 Felis catus ENSFCAG00000018097 I 0.742
ENSPANG00000024250 Papio anubis ENSPANG00000024250 I 0.742
TMUE_s0011007500 Trichuris muris TMUE_s0011007500 I 0.742
ENSMEUG00000009893 Macropus eugenii ENSMEUG00000009893 I 0.730
ENSCJAG00000031891 Callithrix jacchus ENSCJAG00000031891 I 0.729
ECPE_0001391101 Echinostoma caproni ECPE_0001391101 I 0.727
DAPPUDRAFT_311200 Daphnia pulex DAPPUDRAFT_311200 I 0.727
GM24682 Drosophila sechellia FBgn0179545 I 0.727
LOC100912427 Rattus norvegicus ENSRNOG00000032902 I 0.727
YBX2 Sorex araneus ENSSARG00000000488 I 0.727
T265_06248 Opisthorchis viverrini T265_06248 I 0.727
YBX2 Homo sapiens ENSG00000006047 I 0.727
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.727
YBX2 Pan troglodytes ENSPTRG00000008673 I 0.727
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.727
YBX3 Otolemur garnettii ENSOGAG00000013245 I 0.727
YBX1 Pan troglodytes ENSPTRG00000006456 I 0.727
GF10852 Drosophila ananassae FBgn0087892 I 0.727
yps Drosophila melanogaster FBgn0022959 I 0.727
GA23502 Drosophila pseudoobscura FBgn0244903 I 0.727
ML01365a Mnemiopsis leidyi ML01365a I 0.727
GE20150 Drosophila yakuba FBgn0237472 I 0.727
GK16710 Drosophila willistoni FBgn0218712 I 0.727
GL15684 Drosophila persimilis FBgn0153288 I 0.727
GD12750 Drosophila simulans FBgn0184477 I 0.727
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.714
AAEL001375 Aedes aegypti AAEL001375 I 0.712
CapteG50882 Capitella teleta CapteG50882 I 0.712
Hba_02103 Heterorhabditis bacteriophora Hba_02103 I 0.712
CapteG58124 Capitella teleta CapteG58124 I 0.712
CapteG48743 Capitella teleta CapteG48743 I 0.712
CapteG115648 Capitella teleta CapteG115648 I 0.712
CapteG48958 Capitella teleta CapteG48958 I 0.712
HelroG146547 Helobdella robusta HelroG146547 I 0.712
GH16919 Drosophila grimshawi FBgn0124390 I 0.712
GI13673 Drosophila mojavensis FBgn0136428 I 0.712
ENSSSCG00000008860 Sus scrofa ENSSSCG00000008860 I 0.712
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.712
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.712
ENSPSIG00000009540 Pelodiscus sinensis ENSPSIG00000009540 I 0.712
LLOJ009520 Lutzomyia longipalpis LLOJ009520 I 0.712
GJ14010 Drosophila virilis FBgn0201228 I 0.712
AATE005175 Anopheles atroparvus AATE005175 I 0.712
ASIS019575 Anopheles sinensis ASIS019575 I 0.712
HelroG133388 Helobdella robusta HelroG133388 I 0.712
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.712
ENSCJAG00000035469 Callithrix jacchus ENSCJAG00000035469 I 0.712
ISCW005281 Ixodes scapularis ISCW005281 I 0.712
ENSOCUG00000000147 Oryctolagus cuniculus ENSOCUG00000000147 I 0.706