CSP1 (Arabidopsis thaliana)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 AT4G36020 T164271_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G36020.1 CSD 11 77
AT4G36020.2 CSD 11 77
AT4G36020.3 CSD 11 77

Links

Other CSD family TFs
Other Arabidopsis thaliana TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7867s1467 Boechera stricta Bostr.7867s1467 N 0.924
CSDP1 Arabidopsis lyrata fgenesh2_kg.7__465__AT4G36020.1 N 0.879
Thhalv10026001m.g Eutrema salsugineum Thhalv10026001m.g N 0.864
Bo7g117730 Brassica oleracea Bo7g117730 N 0.833
Bra017742 Brassica rapa Bra017742 N 0.833
Carubv10006250m.g Capsella rubella Carubv10006250m.g N 0.818
Cagra.2236s0009 Capsella grandiflora Cagra.2236s0009 N 0.818
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.818
Bo1g006000 Brassica oleracea Bo1g006000 N 0.818
Bostr.18351s0255 Boechera stricta Bostr.18351s0255 N 0.818
Carubv10015336m.g Capsella rubella Carubv10015336m.g N 0.803
Cagra.3126s0019 Capsella grandiflora Cagra.3126s0019 N 0.803
ATCSP3 Arabidopsis lyrata fgenesh2_kg.3__3388__AT2G17870.1 N 0.803
Bra011655 Brassica rapa Bra011655 N 0.788
Bra002099 Brassica rapa Bra002099 N 0.727
evm.TU.supercontig_6.261 Carica papaya evm.TU.supercontig_6.261 N 0.727
CSP3 Arabidopsis thaliana AT2G17870 N 0.727
Bo7g012920 Brassica oleracea Bo7g012920 N 0.727