CJA05984 (Caenorhabditis japonica)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 CJA05984 T164359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.939 0.939
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.742 0.742
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.742 0.742
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.742 0.742
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.742 0.742
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.727 0.727
Smp_097750
M01208_2.00 		Schistosoma mansoni
TAGATAGA
TCTATCTA		 PBM
Lambert et al.(2019)
pTH7807 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA05984 CSD 35 104

Links

Other CSD family TFs
Other Caenorhabditis japonica TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cey-1 Caenorhabditis elegans WBGene00000472 D 0.939
CBG02981 Caenorhabditis briggsae CBG02981 I 0.939
CRE01789 Caenorhabditis remanei CRE01789 I 0.924
CBN16711 Caenorhabditis brenneri CBN16711 I 0.924
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.879
OESDEN_18169 Oesophagostomum dentatum OESDEN_18169 I 0.803
SVUK_0001307901 Strongylus vulgaris SVUK_0001307901 I 0.803
nRc.2.0.1.g10725 Romanomermis culicivorax nRc.2.0.1.g10725 I 0.803
HPLM_0000375501 Haemonchus placei HPLM_0000375501 I 0.803
Hba_02103 Heterorhabditis bacteriophora Hba_02103 I 0.803
HCOI01877200 Haemonchus contortus HCOI01877200 I 0.803
TMUE_s0011007500 Trichuris muris TMUE_s0011007500 I 0.803
TTRE_0000405201 Trichuris trichiura TTRE_0000405201 I 0.803
ANCCAN_14498 Ancylostoma caninum ANCCAN_14498 I 0.803
NECAME_15956 Necator americanus NECAME_15956 I 0.803
ANCCEY_03875 Ancylostoma ceylanicum ANCCEY_03875 I 0.803
ANCDUO_02786 Ancylostoma duodenale ANCDUO_02786 I 0.803
CLEC013417 Cimex lectularius CLEC013417 I 0.800
DME_0000984901 Dracunculus medinensis DME_0000984901 I 0.788
EEL_0000726801 Elaeophora elaphi EEL_0000726801 I 0.788
GPUH_0001124501 Gongylonema pulchrum GPUH_0001124501 I 0.788
DICVIV_10680 Dictyocaulus viviparus DICVIV_10680 I 0.788
D918_04890 Trichuris suis D918_04890 I 0.788
nDi.2.2.2.g07679 Dirofilaria immitis nDi.2.2.2.g07679 I 0.788
TELCIR_06115 Teladorsagia circumcincta TELCIR_06115 I 0.788
LOAG_17966 Loa loa LOAG_17966 I 0.788
ACOC_0000576201 Angiostrongylus costaricensis ACOC_0000576201 I 0.788
nOo.2.0.1.g01690 Onchocerca ochengi nOo.2.0.1.g01690 I 0.788
WUBG_03960 Wuchereria bancrofti WUBG_03960 I 0.788
nAv.1.0.1.g07732 Acanthocheilonema viteae nAv.1.0.1.g07732 I 0.788
NBR_0000795701 Nippostrongylus brasiliensis NBR_0000795701 I 0.788
ACAC_0000909201 Angiostrongylus cantonensis ACAC_0000909201 I 0.788
Bm3781 Brugia malayi Bm3781 I 0.788
nLs.2.1.2.g03745 Litomosoides sigmodontis nLs.2.1.2.g03745 I 0.788
HPBE_0000695301 Heligmosomoides bakeri HPBE_0000695301 I 0.788
ALUE_0000394301 Ascaris lumbricoides ALUE_0000394301 I 0.773
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.773
WBGene00247949 Onchocerca volvulus WBGene00247949 I 0.773
TCNE_0001642201 Toxocara canis TCNE_0001642201 I 0.773
ASIM_0001243501 Anisakis simplex ASIM_0001243501 I 0.773
ISCW005281 Ixodes scapularis ISCW005281 I 0.773
EVEC_0000436301 Enterobius vermicularis EVEC_0000436301 I 0.773
D917_04190 Trichinella nativa D917_04190 I 0.773
ASU_11432 Ascaris suum ASU_11432 I 0.773
TCLT_0000736301 Thelazia callipaeda TCLT_0000736301 I 0.769
L892_g19487 Steinernema scapterisci L892_g19487 I 0.758
HelroG133388 Helobdella robusta HelroG133388 I 0.758
CapteG166603 Capitella teleta CapteG166603 I 0.758
L889_g15794 Steinernema feltiae L889_g15794 I 0.758
L596_g21676 Steinernema carpocapsae L596_g21676 I 0.758
ENSSTOG00000008630 Ictidomys tridecemlineatus ENSSTOG00000008630 I 0.742
ENSSSCG00000030357 Sus scrofa ENSSSCG00000030357 I 0.742
YBX2 Sus scrofa ENSSSCG00000017938 I 0.742
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.742
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.742
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.742
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.742
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.742
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.742
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.742
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.742
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.742
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.742
YBX2 Procavia capensis ENSPCAG00000008019 I 0.742
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.742
ENSPANG00000024250 Papio anubis ENSPANG00000024250 I 0.742
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.742
ENSPSIG00000012364 Pelodiscus sinensis ENSPSIG00000012364 I 0.742
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.742
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.742
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.742
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.742
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.742
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.742
YBX3 Sus scrofa ENSSSCG00000000633 I 0.742
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.742
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.742
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.742
CAA42778 Xenopus laevis CAA42778 I 0.742
AAI30161 Xenopus laevis AAI30161 I 0.742
AAH42217 Xenopus laevis AAH42217 I 0.742
ybx2 Xenopus tropicalis XB-GENE-5798907 I 0.742
ybx2.L Xenopus laevis XB-GENE-6252609 I 0.742
L893_g29692 Steinernema glaseri L893_g29692 I 0.742
L898_g6257 Steinernema monticolum L898_g6257 I 0.742
TRE_0000129901 Trichobilharzia regenti TRE_0000129901 I 0.742
BGLB002206 Biomphalaria glabrata BGLB002206 I 0.742
ybx1.S Xenopus laevis XB-GENE-865405 I 0.742
Ocbimv22002282m.g Octopus bimaculoides Ocbimv22002282m.g I 0.742
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.742
Alligator_sinensis_CCG005029.1 Alligator sinensis Alligator_sinensis_CCG005029.1 I 0.742
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.742
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.742
Aan_R014295 Calypte anna Aan_R014295 I 0.742
Aan_R001440 Calypte anna Aan_R001440 I 0.742
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.742
ENSMMUP00000017257 Macaca fascicularis ENSMMUP00000017257 I 0.742
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.742
Ogr10632 Ophisaurus gracilis Ogr10632 I 0.742
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.742
ENSP00000007699-D1 Bos grunniens ENSP00000007699-D1 I 0.742
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.742
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.742
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.742
YBX2 Felis catus ENSFCAG00000018097 I 0.742
YBX3 Felis catus ENSFCAG00000027748 I 0.742
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.742
YBX3 Echinops telfairi ENSETEG00000002557 I 0.742
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.742
YBX2 Equus caballus ENSECAG00000009996 I 0.742
YBX3 Equus caballus ENSECAG00000013777 I 0.742
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.742
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.742
YBX1 Homo sapiens ENSG00000065978 D 0.742
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.742
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.742
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.742
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.742
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.742
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.742
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.742
YBX1 Gallus gallus ENSGALG00000004848 I 0.742
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.742
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.742
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.742
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.742
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.742
YBX3 Bos taurus ENSBTAG00000009663 I 0.742
YBX1 Bos taurus ENSBTAG00000017368 I 0.742
YBX1 Canis familiaris ENSCAFG00000002541 I 0.742
YBX3 Canis familiaris ENSCAFG00000013401 I 0.742
YBX2 Bos taurus ENSBTAG00000009126 I 0.742
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.742
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.742
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.742
ENSAMEG00000016564 Ailuropoda melanoleuca ENSAMEG00000016564 I 0.742
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.742
ENSCAFG00000016128 Canis familiaris ENSCAFG00000016128 I 0.742
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.742
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.742
ENSCSAG00000011857 Chlorocebus sabaeus ENSCSAG00000011857 I 0.742
ybx1 Danio rerio ENSDARG00000004757 I 0.742
YBX2 Dasypus novemcinctus ENSDNOG00000013746 I 0.742
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.742
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.742
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.742
YBX2 Callithrix jacchus ENSCJAG00000016581 I 0.742
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.742
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.742
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.742
YBX3 Homo sapiens ENSG00000060138 I 0.742
Ybx3 Mus musculus ENSMUSG00000030189 I 0.742
ENSNLEG00000008063 Nomascus leucogenys ENSNLEG00000008063 I 0.742
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.742
Ybx1 Mus musculus ENSMUSG00000028639 I 0.742
Ybx2 Mus musculus ENSMUSG00000018554 I 0.742
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.742
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.742
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.742
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.742
ENSOARG00000011562 Ovis aries ENSOARG00000011562 I 0.742
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.742
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.742
ybx1 Oryzias latipes ENSORLG00000004225 I 0.742
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.742
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.742
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.742
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.742
ENSMMUG00000022712 Macaca mulatta ENSMMUG00000022712 I 0.742
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.742
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.742
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.742
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.738
YBX3 Procavia capensis ENSPCAG00000001397 I 0.738
BTMF_0000180501 Brugia timori BTMF_0000180501 I 0.736
YBX2 Echinops telfairi ENSETEG00000014271 I 0.732
YBX2 Tursiops truncatus ENSTTRG00000009780 I 0.732
Ybx2 Dipodomys ordii ENSDORG00000010882 I 0.732
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.729
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.727
HelroG146547 Helobdella robusta HelroG146547 I 0.727
Smp_097750 Schistosoma mansoni Smp_097750 D 0.727
YBX1 Pan troglodytes ENSPTRG00000006456 I 0.727
SROB_0000337801 Schistosoma rodhaini SROB_0000337801 I 0.727
SROB_0000030901 Schistosoma rodhaini SROB_0000030901 I 0.727
YBX2 Sorex araneus ENSSARG00000000488 I 0.727
SCUD_0000012301 Schistosoma curassoni SCUD_0000012301 I 0.727
LotgiG78612 Lottia gigantea LotgiG78612 I 0.727
SBAD_0000071701 Soboliphyme baturini SBAD_0000071701 I 0.727
SCUD_0000800101 Schistosoma curassoni SCUD_0000800101 I 0.727
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.727
SMTD_0000035001 Schistosoma mattheei SMTD_0000035001 I 0.727
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.727
SMRZ_0001938001 Schistosoma margrebowiei SMRZ_0001938001 I 0.727
SMTD_0001373001 Schistosoma mattheei SMTD_0001373001 I 0.727
A_06056 Schistosoma haematobium A_06056 I 0.727
CGI_10014112 Crassostrea gigas CGI_10014112 I 0.727
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.727
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.727
ybx3 Xenopus tropicalis XB-GENE-1007558 I 0.727
TRE_0000940901 Trichobilharzia regenti TRE_0000940901 I 0.727
Sjc_0001400 Schistosoma japonicum Sjc_0001400 I 0.727
Sjc_0026800 Schistosoma japonicum Sjc_0026800 I 0.727
SMU15014702 Schmidtea mediterranea SMU15014702 I 0.727
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.727
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.727
ENSAMXG00000007090 Astyanax mexicanus ENSAMXG00000007090 I 0.727
ENSCAFG00000017286 Canis familiaris ENSCAFG00000017286 I 0.727
YBX2 Pan troglodytes ENSPTRG00000008673 I 0.727
NEMVEDRAFT_v1g104083 Nematostella vectensis NEMVEDRAFT_v1g104083 D 0.727
Smp_097800 Schistosoma mansoni Smp_097800 I 0.727
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.727
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.727
YBX2 Homo sapiens ENSG00000006047 I 0.727
YBX1 Loxodonta africana ENSLAFG00000031170 I 0.718
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.714
RSKR_0000861200 Rhabditophanes kr3021 RSKR_0000861200 I 0.712
SSTP_0000685800 Strongyloides stercoralis SSTP_0000685800 I 0.712
DAPPUDRAFT_311200 Daphnia pulex DAPPUDRAFT_311200 I 0.712
TRE_0001884901 Trichobilharzia regenti TRE_0001884901 I 0.712
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.712
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.712
ENSORLG00000006269 Oryzias latipes ENSORLG00000006269 I 0.712
SVE_1573400 Strongyloides venezuelensis SVE_1573400 I 0.712
T265_06248 Opisthorchis viverrini T265_06248 I 0.712
SPAL_0000982100 Strongyloides papillosus SPAL_0000982100 I 0.712
genemark-nMf.1.1.scaf00296-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00296-processed-gene-0.4 I 0.712
XP_002154000.1 Hydra magnipapillata XP_002154000.1 I 0.712
XP_002159745.1 Hydra magnipapillata XP_002159745.1 I 0.712
ADIR008587 Anopheles dirus ADIR008587 I 0.712
ENSGMOG00000007765 Gadus morhua ENSGMOG00000007765 I 0.712
Minc12652 Meloidogyne incognita Minc12652 I 0.712
YBX2 Tetraodon nigroviridis ENSTNIG00000010139 I 0.712
ENSXMAG00000015755 Xiphophorus maculatus ENSXMAG00000015755 I 0.712
YBX2 Gasterosteus aculeatus ENSGACG00000019392 I 0.712
SNAPOd2T00011389001 Oikopleura dioica SNAPOd2T00011389001 I 0.712
ENSTRUG00000011813 Takifugu rubripes ENSTRUG00000011813 I 0.712
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.712
HMEL008461 Heliconius melpomene HMEL008461 I 0.712
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.712
ENSPFOG00000007181 Poecilia formosa ENSPFOG00000007181 I 0.712
YBX3 Otolemur garnettii ENSOGAG00000013245 I 0.712
ECPE_0000786301 Echinostoma caproni ECPE_0000786301 I 0.712
PHUM156710 Pediculus humanus PHUM156710 I 0.712
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I 0.712
YQE_07192 Dendroctonus ponderosae YQE_07192 I 0.712
ENSOANG00000013173 Ornithorhynchus anatinus ENSOANG00000013173 I 0.708
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.708
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.703
ENSMLUG00000029452 Myotis lucifugus ENSMLUG00000029452 I 0.700
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 I 0.700