CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPIJ002248
(
Culex quinquefasciatus
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
CPIJ002248
T164365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR
YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.784
0.784
YBX1
M10411_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.784
0.784
YBX1
M10412_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.784
0.784
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD
HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.784
0.784
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN
NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.757
0.757
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ002248-PA
CSD
4
44
YTTIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGP
Links
Other
CSD
family TFs
Other
Culex quinquefasciatus
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ002248
Culex pipiens
CpipJ_CPIJ002248
I
1.000
AEPI000589
Anopheles epiroticus
AEPI000589
I
0.892
AFUN005441
Anopheles funestus
AFUN005441
I
0.892
ACUA007180
Anopheles culicifacies
ACUA007180
I
0.892
ACOM024661
Anopheles coluzzii
ACOM024661
I
0.892
AARA007412
Anopheles arabiensis
AARA007412
I
0.892
ACHR003797
Anopheles christyi
ACHR003797
I
0.892
AMEC011905
Anopheles melas
AMEC011905
I
0.892
AALB005039
Anopheles albimanus
AALB005039
I
0.892
ASTEI02878
Anopheles stephensi
ASTEI02878
I
0.892
AQUA011660
Anopheles quadriannulatus
AQUA011660
I
0.892
AGAP006108
Anopheles gambiae
AGAP006108
I
0.892
AMIN009954
Anopheles minimus
AMIN009954
I
0.892
AMEM010049
Anopheles merus
AMEM010049
I
0.892
PHUM156710
Pediculus humanus
PHUM156710
I
0.865
MDOA013639
Musca domestica
MDOA013639
I
0.838
CLEC013418
Cimex lectularius
CLEC013418
I
0.838
e_gw.440.24.1
Branchiostoma floridae
e_gw.440.24.1
I
0.838
Sakowv30002198m.g
Saccoglossus kowalevskii
Sakowv30002198m.g
I
0.811
ENSMPUG00000010386
Mustela putorius furo
ENSMPUG00000010386
I
0.811
YBX2
Vicugna pacos
ENSVPAG00000003104
I
0.811
Myotis_brandtii_YBX2_10021025
Myotis brandtii
Myotis_brandtii_YBX2_10021025
I
0.811
LDEC002142
Leptinotarsa decemlineata
LDEC002142
I
0.811
Cmyd_10000339
Chelonia mydas
Cmyd_10000339
I
0.811
HHAL001434-PA
Halyomorpha halys
HHAL001434-PA
I
0.811
CapteG166603
Capitella teleta
CapteG166603
I
0.811
YBX2
Microcebus murinus
ENSMICG00000012453
I
0.811
Cmyd_10002115
Chelonia mydas
Cmyd_10002115
I
0.806
ENSSHAG00000014452
Sarcophilus harrisii
ENSSHAG00000014452
I
0.784
YBX2
Sorex araneus
ENSSARG00000000488
I
0.784
Ybx1
Rattus norvegicus
ENSRNOG00000023786
I
0.784
Ybx3
Rattus norvegicus
ENSRNOG00000005480
I
0.784
YBX3
Tupaia belangeri
ENSTBEG00000012570
I
0.784
ENSSTOG00000027979
Ictidomys tridecemlineatus
ENSSTOG00000027979
I
0.784
ENSSTOG00000026413
Ictidomys tridecemlineatus
ENSSTOG00000026413
I
0.784
ENSSTOG00000022212
Ictidomys tridecemlineatus
ENSSTOG00000022212
I
0.784
YBX3
Sus scrofa
ENSSSCG00000000633
I
0.784
ENSPANG00000013156
Papio anubis
ENSPANG00000013156
I
0.784
ENSPANG00000010280
Papio anubis
ENSPANG00000010280
I
0.784
YBX3
Taeniopygia guttata
ENSTGUG00000012047
I
0.784
ybx1
Oryzias latipes
ENSORLG00000004225
I
0.784
YBX1
Otolemur garnettii
ENSOGAG00000006784
I
0.784
ENSOCUG00000022716
Oryctolagus cuniculus
ENSOCUG00000022716
I
0.784
ENSPANG00000016576
Papio anubis
ENSPANG00000016576
I
0.784
ENSPFOG00000011441
Poecilia formosa
ENSPFOG00000011441
I
0.784
YBX1
Pteropus vampyrus
ENSPVAG00000005504
I
0.784
ENSPSIG00000011017
Pelodiscus sinensis
ENSPSIG00000011017
I
0.784
ENSPSIG00000009247
Pelodiscus sinensis
ENSPSIG00000009247
I
0.784
ENSPPYG00000004279
Pongo abelii
ENSPPYG00000004279
I
0.784
YBX3
Pteropus vampyrus
ENSPVAG00000006740
I
0.784
Brh_R007443
Buceros rhinoceros
Brh_R007443
I
0.784
Pvit_10025
Pogona vitticeps
Pvit_10025
I
0.784
Tal_R003478
Tyto alba
Tal_R003478
I
0.784
Gfo_R007354
Geospiza fortis
Gfo_R007354
I
0.784
ENSP00000389639-D2
Bos grunniens
ENSP00000389639-D2
I
0.784
ENSP00000228251
Macaca fascicularis
ENSP00000228251
I
0.784
AAH42217
Xenopus laevis
AAH42217
I
0.784
AAI30161
Xenopus laevis
AAI30161
I
0.784
ybx1.S
Xenopus laevis
XB-GENE-865405
I
0.784
ybx2.S
Xenopus laevis
XB-GENE-6254213
I
0.784
ybx1
Xenopus tropicalis
XB-GENE-480746
I
0.784
CAA42778
Xenopus laevis
CAA42778
I
0.784
ENSBTAP00000012735-D1
Bos grunniens
ENSBTAP00000012735-D1
I
0.784
Cmyd_10003103
Chelonia mydas
Cmyd_10003103
I
0.784
ENSXMAG00000018674
Xiphophorus maculatus
ENSXMAG00000018674
I
0.784
YBX1
Vicugna pacos
ENSVPAG00000000068
I
0.784
ybx1
Takifugu rubripes
ENSTRUG00000015333
I
0.784
ybx1
Tetraodon nigroviridis
ENSTNIG00000011989
I
0.784
RPRC001993
Rhodnius prolixus
RPRC001993
I
0.784
SPU_003107
Strongylocentrotus purpuratus
SPU_003107
I
0.784
ENSOCUG00000021258
Oryctolagus cuniculus
ENSOCUG00000021258
I
0.784
Afo_R014263
Aptenodytes forsteri
Afo_R014263
I
0.784
Aan_R014295
Calypte anna
Aan_R014295
I
0.784
Aan_R001440
Calypte anna
Aan_R001440
I
0.784
YBX1
Taeniopygia guttata
ENSTGUG00000017262
I
0.784
ENSONIG00000002062
Oreochromis niloticus
ENSONIG00000002062
I
0.784
Ybx3
Dipodomys ordii
ENSDORG00000009103
I
0.784
ENSECAG00000008961
Equus caballus
ENSECAG00000008961
I
0.784
YBX3
Equus caballus
ENSECAG00000013777
I
0.784
ENSDNOG00000040947
Dasypus novemcinctus
ENSDNOG00000040947
I
0.784
ybx1
Danio rerio
ENSDARG00000004757
I
0.784
YBX3
Cavia porcellus
ENSCPOG00000011329
I
0.784
ENSCSAG00000008744
Chlorocebus sabaeus
ENSCSAG00000008744
I
0.784
YBX1
Erinaceus europaeus
ENSEEUG00000005657
I
0.784
YBX3
Erinaceus europaeus
ENSEEUG00000010415
I
0.784
YBX1
Homo sapiens
ENSG00000065978
D
0.784
ybx1
Gasterosteus aculeatus
ENSGACG00000006447
I
0.784
YBX3
Homo sapiens
ENSG00000060138
I
0.784
YBX3
Felis catus
ENSFCAG00000027748
I
0.784
YBX3
Echinops telfairi
ENSETEG00000002557
I
0.784
ENSFALG00000003661
Ficedula albicollis
ENSFALG00000003661
I
0.784
YBX1
Cavia porcellus
ENSCPOG00000010888
I
0.784
ENSCJAG00000021660
Callithrix jacchus
ENSCJAG00000021660
I
0.784
ENSAPLG00000003147
Anas platyrhynchos
ENSAPLG00000003147
I
0.784
ENSAPLG00000004899
Anas platyrhynchos
ENSAPLG00000004899
I
0.784
YBX3
Bos taurus
ENSBTAG00000009663
I
0.784
ENSAMXG00000014478
Astyanax mexicanus
ENSAMXG00000014478
I
0.784
ENSAMEG00000009393
Ailuropoda melanoleuca
ENSAMEG00000009393
I
0.784
ACYPI003867
Acyrthosiphon pisum
ACYPI003867
I
0.784
ENSAMEG00000000494
Ailuropoda melanoleuca
ENSAMEG00000000494
I
0.784
YBX1
Bos taurus
ENSBTAG00000017368
I
0.784
YBX1
Canis familiaris
ENSCAFG00000002541
I
0.784
ENSCJAG00000003155
Callithrix jacchus
ENSCJAG00000003155
I
0.784
ENSCJAG00000010572
Callithrix jacchus
ENSCJAG00000010572
I
0.784
YBX3
Choloepus hoffmanni
ENSCHOG00000011988
I
0.784
ENSCAFG00000016523
Canis familiaris
ENSCAFG00000016523
I
0.784
YBX3
Canis familiaris
ENSCAFG00000013401
I
0.784
ENSCAFG00000016520
Canis familiaris
ENSCAFG00000016520
I
0.784
YBX1
Gallus gallus
ENSGALG00000004848
I
0.784
ENSECAG00000023592
Equus caballus
ENSECAG00000023592
I
0.784
YBX1
Monodelphis domestica
ENSMODG00000017214
I
0.784
ENSMODG00000022963
Monodelphis domestica
ENSMODG00000022963
I
0.784
YBX3
Macaca mulatta
ENSMMUG00000022469
I
0.784
ENSMMUG00000013136
Macaca mulatta
ENSMMUG00000013136
I
0.784
ENSMICG00000014984
Microcebus murinus
ENSMICG00000014984
I
0.784
ENSOARG00000020447
Ovis aries
ENSOARG00000020447
I
0.784
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.784
ENSOANG00000001663
Ornithorhynchus anatinus
ENSOANG00000001663
I
0.784
Ybx1
Mus musculus
ENSMUSG00000028639
I
0.784
ENSGALG00000018512
Gallus gallus
ENSGALG00000018512
I
0.784
ENSMPUG00000013922
Mustela putorius furo
ENSMPUG00000013922
I
0.784
Ybx3
Mus musculus
ENSMUSG00000030189
I
0.784
ENSNLEG00000012324
Nomascus leucogenys
ENSNLEG00000012324
I
0.784
ENSMPUG00000018977
Mustela putorius furo
ENSMPUG00000018977
I
0.784
YBX3
Meleagris gallopavo
ENSMGAG00000014224
I
0.784
ENSLACG00000018135
Latimeria chalumnae
ENSLACG00000018135
I
0.784
ENSLAFG00000007597
Loxodonta africana
ENSLAFG00000007597
I
0.784
ENSOARG00000020919
Ovis aries
ENSOARG00000020919
I
0.784
YBX2
Gorilla gorilla
ENSGGOG00000007399
I
0.784
YBX3
Gorilla gorilla
ENSGGOG00000001352
I
0.784
YBX1
Meleagris gallopavo
ENSMGAG00000006879
I
0.784
YBX3
Loxodonta africana
ENSLAFG00000017247
I
0.784
ENSLOCG00000013819
Lepisosteus oculatus
ENSLOCG00000013819
I
0.784
ENSLOCG00000002530
Lepisosteus oculatus
ENSLOCG00000002530
I
0.784
CapteG121832
Capitella teleta
CapteG121832
I
0.765
ENSOCUG00000000147
Oryctolagus cuniculus
ENSOCUG00000000147
I
0.765
CapteG48958
Capitella teleta
CapteG48958
I
0.757
CapteG105284
Capitella teleta
CapteG105284
I
0.757
ENSPANG00000005177
Papio anubis
ENSPANG00000005177
I
0.757
ENSPANG00000019627
Papio anubis
ENSPANG00000019627
I
0.757
ENSGMOG00000015216
Gadus morhua
ENSGMOG00000015216
I
0.757
Alligator_sinensis_CCG014301.1
Alligator sinensis
Alligator_sinensis_CCG014301.1
I
0.744
CapteG58124
Capitella teleta
CapteG58124
I
0.730
ENSCJAG00000007407
Callithrix jacchus
ENSCJAG00000007407
I
0.730
ENSCJAG00000035469
Callithrix jacchus
ENSCJAG00000035469
I
0.730
ENSOCUG00000026608
Oryctolagus cuniculus
ENSOCUG00000026608
I
0.730
ENSCJAG00000033824
Callithrix jacchus
ENSCJAG00000033824
I
0.730
ENSCJAG00000035120
Callithrix jacchus
ENSCJAG00000035120
I
0.730
ENSMLUG00000029452
Myotis lucifugus
ENSMLUG00000029452
I
0.725
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
I
0.725
GPUH_0001124501
Gongylonema pulchrum
GPUH_0001124501
I
0.703
EEL_0000726801
Elaeophora elaphi
EEL_0000726801
I
0.703
T265_06248
Opisthorchis viverrini
T265_06248
I
0.703
nAv.1.0.1.g07732
Acanthocheilonema viteae
nAv.1.0.1.g07732
I
0.703
nLs.2.1.2.g03745
Litomosoides sigmodontis
nLs.2.1.2.g03745
I
0.703
DME_0000984901
Dracunculus medinensis
DME_0000984901
I
0.703
nDi.2.2.2.g07679
Dirofilaria immitis
nDi.2.2.2.g07679
I
0.703
nOo.2.0.1.g01690
Onchocerca ochengi
nOo.2.0.1.g01690
I
0.703
WBGene00247949
Onchocerca volvulus
WBGene00247949
I
0.703
ENSONIG00000018954
Oreochromis niloticus
ENSONIG00000018954
I
0.703
ENSCJAG00000031567
Callithrix jacchus
ENSCJAG00000031567
I
0.703
ENSPPYG00000001466
Pongo abelii
ENSPPYG00000001466
I
0.703
ENSOGAG00000014939
Otolemur garnettii
ENSOGAG00000014939
I
0.703
LOAG_17966
Loa loa
LOAG_17966
I
0.703
WUBG_03960
Wuchereria bancrofti
WUBG_03960
I
0.703
Bm3781
Brugia malayi
Bm3781
I
0.703
D918_04890
Trichuris suis
D918_04890
I
0.703