ENSBTAG00000045616 (Bos taurus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSBTAG00000045616 T164444_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.712 0.712
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.712 0.712
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.712 0.712
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000055451 CSD 25 94

Links

Other CSD family TFs
Other Bos taurus TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH42217 Xenopus laevis AAH42217 I 0.712
AAI30161 Xenopus laevis AAI30161 I 0.712
Aan_R001440 Calypte anna Aan_R001440 I 0.712
Aan_R014295 Calypte anna Aan_R014295 I 0.712
ADIR008587 Anopheles dirus ADIR008587 I 0.712
Afo_R006672 Aptenodytes forsteri Afo_R006672 I 0.729
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.712
Alligator_sinensis_CCG005029.1 Alligator sinensis Alligator_sinensis_CCG005029.1 I 0.712
BGLB002206 Biomphalaria glabrata BGLB002206 I 0.712
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.712
Brh_R010004 Buceros rhinoceros Brh_R010004 I 0.729
CAA42778 Xenopus laevis CAA42778 I 0.712
CapteG166603 Capitella teleta CapteG166603 I 0.727
Cmyd_10000339 Chelonia mydas Cmyd_10000339 I 0.703
Cmyd_10002115 Chelonia mydas Cmyd_10002115 I 0.722
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.703
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.712
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.712
ENSAMEG00000015874 Ailuropoda melanoleuca ENSAMEG00000015874 I 0.758
ENSAMEG00000016564 Ailuropoda melanoleuca ENSAMEG00000016564 I 0.712
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.712
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.712
ENSBTAG00000004151 Bos taurus ENSBTAG00000004151 N 0.879
YBX2 Bos taurus ENSBTAG00000009126 I 0.712
YBX3 Bos taurus ENSBTAG00000009663 I 0.712
YBX1 Bos taurus ENSBTAG00000017368 I 0.712
ENSBTAG00000047279 Bos taurus ENSBTAG00000047279 N 0.818
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.712
YBX1 Canis familiaris ENSCAFG00000002541 I 0.712
YBX3 Canis familiaris ENSCAFG00000013401 I 0.712
ENSCAFG00000016128 Canis familiaris ENSCAFG00000016128 I 0.712
ENSCAFG00000016520 Canis familiaris ENSCAFG00000016520 I 0.773
ENSCAFG00000016523 Canis familiaris ENSCAFG00000016523 I 0.773
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.712
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.712
YBX2 Callithrix jacchus ENSCJAG00000016581 I 0.712
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.712
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.712
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.712
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.712
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.712
ENSCSAG00000011857 Chlorocebus sabaeus ENSCSAG00000011857 I 0.712
ybx1 Danio rerio ENSDARG00000004757 I 0.712
YBX2 Dasypus novemcinctus ENSDNOG00000013746 I 0.712
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I 0.788
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.712
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.712
YBX2 Equus caballus ENSECAG00000009996 I 0.712
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.712
YBX3 Equus caballus ENSECAG00000013777 I 0.712
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.712
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.712
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.712
YBX3 Echinops telfairi ENSETEG00000002557 I 0.712
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.712
YBX2 Felis catus ENSFCAG00000018097 I 0.712
ENSFCAG00000022604 Felis catus ENSFCAG00000022604 I 0.729
YBX3 Felis catus ENSFCAG00000027748 I 0.712
YBX3 Homo sapiens ENSG00000060138 I 0.712
YBX1 Homo sapiens ENSG00000065978 D 0.714
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.712
YBX1 Gallus gallus ENSGALG00000004848 I 0.712
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.712
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.712
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.714
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.712
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.712
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.712
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.712
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.712
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.712
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.712
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.712
YBX2 Microcebus murinus ENSMICG00000012453 I 0.723
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.712
YBX3 Myotis lucifugus ENSMLUG00000007476 I 0.714
ENSMLUG00000029452 Myotis lucifugus ENSMLUG00000029452 I 0.700
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.712
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.712
ENSMMUG00000022712 Macaca mulatta ENSMMUG00000022712 I 0.712
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.723
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.712
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.712
ENSMPUG00000018977 Mustela putorius furo ENSMPUG00000018977 I 0.773
Ybx2 Mus musculus ENSMUSG00000018554 I 0.712
Ybx1 Mus musculus ENSMUSG00000028639 I 0.712
Ybx3 Mus musculus ENSMUSG00000030189 I 0.712
ENSNLEG00000008063 Nomascus leucogenys ENSNLEG00000008063 I 0.712
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.712
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.712
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.712
ENSOARG00000004633 Ovis aries ENSOARG00000004633 I 0.924
ENSOARG00000005439 Ovis aries ENSOARG00000005439 N 0.831
ENSOARG00000005470 Ovis aries ENSOARG00000005470 N 0.818
ENSOARG00000005509 Ovis aries ENSOARG00000005509 N 0.742
ENSOARG00000011562 Ovis aries ENSOARG00000011562 I 0.712
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.712
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.712
ENSOCUG00000000147 Oryctolagus cuniculus ENSOCUG00000000147 I 0.706
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 I 0.700
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 I 0.700
ENSOCUG00000028047 Oryctolagus cuniculus ENSOCUG00000028047 I 0.729
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.712
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.712
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.712
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.712
ybx1 Oryzias latipes ENSORLG00000004225 I 0.712
ENSP00000007699-D1 Bos grunniens ENSP00000007699-D1 I 0.712
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.712
ENSP00000228251-D4 Bos grunniens ENSP00000228251-D4 N 0.879
ENSP00000389639-D2 Bos grunniens ENSP00000389639-D2 I 0.714
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.712
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.712
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.712
ENSPANG00000024250 Papio anubis ENSPANG00000024250 I 0.712
YBX3 Procavia capensis ENSPCAG00000001397 I 0.723
YBX2 Procavia capensis ENSPCAG00000008019 I 0.712
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.712
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.712
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.712
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.712
ENSPSIG00000012364 Pelodiscus sinensis ENSPSIG00000012364 I 0.712
YBX3 Pan troglodytes ENSPTRG00000004681 I 0.700
YBX1 Pan troglodytes ENSPTRG00000006456 I 0.712
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.712
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.712
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.712
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.712
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.712
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.712
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.738
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.712
YBX3 Sus scrofa ENSSSCG00000000633 I 0.712
YBX2 Sus scrofa ENSSSCG00000017938 I 0.712
ENSSSCG00000030357 Sus scrofa ENSSSCG00000030357 I 0.712
ENSSTOG00000000116 Ictidomys tridecemlineatus ENSSTOG00000000116 I 0.708
ENSSTOG00000002108 Ictidomys tridecemlineatus ENSSTOG00000002108 I 0.714
ENSSTOG00000008630 Ictidomys tridecemlineatus ENSSTOG00000008630 I 0.712
ENSSTOG00000022212 Ictidomys tridecemlineatus ENSSTOG00000022212 I 0.773
ENSSTOG00000026413 Ictidomys tridecemlineatus ENSSTOG00000026413 I 0.773
ENSSTOG00000027979 Ictidomys tridecemlineatus ENSSTOG00000027979 I 0.773
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.712
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.712
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.712
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.712
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.712
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.712
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.712
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.723
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.712
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.723
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.712
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.712
Gfo_R009480 Geospiza fortis Gfo_R009480 I 0.729
ISCW005281 Ixodes scapularis ISCW005281 I 0.712
Myotis_brandtii_YBX1_10016780 Myotis brandtii Myotis_brandtii_YBX1_10016780 I 0.708
Myotis_brandtii_YBX2_10021025 Myotis brandtii Myotis_brandtii_YBX2_10021025 I 0.708
Ocbimv22002282m.g Octopus bimaculoides Ocbimv22002282m.g I 0.712
PHUM156710 Pediculus humanus PHUM156710 I 0.712
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.712
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.712
SINV21160 Solenopsis invicta SINV21160 I 0.702
Tal_R003478 Tyto alba Tal_R003478 I 0.703
Tal_R011198 Tyto alba Tal_R011198 I 0.729
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.712
ybx1.S Xenopus laevis XB-GENE-865405 I 0.712
YQE_07192 Dendroctonus ponderosae YQE_07192 I 0.712