ENSCJAG00000000083 (Callithrix jacchus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSCJAG00000000083 T164467_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.785 0.785
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.785 0.785
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.785 0.785
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.785 0.785
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000000146 CSD 55 121

Links

Other CSD family TFs
Other Callithrix jacchus TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.785
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.785
ENSAMEG00000016564 Ailuropoda melanoleuca ENSAMEG00000016564 I 0.785
Alligator_sinensis_CCG005029.1 Alligator sinensis Alligator_sinensis_CCG005029.1 I 0.785
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.785
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.769
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.785
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.785
ENSAMXG00000007090 Astyanax mexicanus ENSAMXG00000007090 I 0.708
ENSP00000007699-D1 Bos grunniens ENSP00000007699-D1 I 0.785
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.785
YBX1 Bos taurus ENSBTAG00000017368 I 0.785
YBX3 Bos taurus ENSBTAG00000009663 I 0.785
YBX2 Bos taurus ENSBTAG00000009126 I 0.785
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.738
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.785
ENSCJAG00000035120 Callithrix jacchus ENSCJAG00000035120 I 0.708
ENSCJAG00000032211 Callithrix jacchus ENSCJAG00000032211 I 0.738
ENSCJAG00000031891 Callithrix jacchus ENSCJAG00000031891 I 0.729
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.769
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.785
ENSCJAG00000018832 Callithrix jacchus ENSCJAG00000018832 I 0.738
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.738
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.785
YBX2 Callithrix jacchus ENSCJAG00000016581 I 0.785
Aan_R001440 Calypte anna Aan_R001440 I 0.785
Aan_R014295 Calypte anna Aan_R014295 I 0.785
ENSCAFG00000030502 Canis familiaris ENSCAFG00000030502 I 0.742
YBX1 Canis familiaris ENSCAFG00000002541 I 0.785
YBX3 Canis familiaris ENSCAFG00000013401 I 0.785
ENSCAFG00000016128 Canis familiaris ENSCAFG00000016128 I 0.785
ENSCAFG00000017286 Canis familiaris ENSCAFG00000017286 I 0.785
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.785
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.785
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.785
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.703
ENSCSAG00000011857 Chlorocebus sabaeus ENSCSAG00000011857 I 0.785
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.785
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.785
ybx1 Danio rerio ENSDARG00000004757 I 0.785
YBX2 Dasypus novemcinctus ENSDNOG00000013746 I 0.785
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.785
YBX3 Echinops telfairi ENSETEG00000002557 I 0.785
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.785
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.785
YBX2 Equus caballus ENSECAG00000009996 I 0.785
YBX3 Equus caballus ENSECAG00000013777 I 0.785
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.785
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.785
ENSEEUG00000007494 Erinaceus europaeus ENSEEUG00000007494 I 0.754
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.785
YBX2 Felis catus ENSFCAG00000018097 I 0.785
YBX3 Felis catus ENSFCAG00000027748 I 0.785
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.785
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.769
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.785
YBX1 Gallus gallus ENSGALG00000004848 I 0.785
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.785
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.785
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.788
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.785
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.758
YBX2 Homo sapiens ENSG00000006047 I 0.758
YBX3 Homo sapiens ENSG00000060138 I 0.785
YBX1 Homo sapiens ENSG00000065978 D 0.785
ENSSTOG00000008630 Ictidomys tridecemlineatus ENSSTOG00000008630 I 0.785
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.785
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.785
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.754
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.785
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.785
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.785
ENSMMUP00000017257 Macaca fascicularis ENSMMUP00000017257 I 0.788
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.785
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.785
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.785
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.785
ENSMMUG00000022712 Macaca mulatta ENSMMUG00000022712 I 0.785
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.785
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.785
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.785
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.769
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.758
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.785
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.738
Ybx2 Mus musculus ENSMUSG00000018554 I 0.785
Ybx1 Mus musculus ENSMUSG00000028639 I 0.785
Ybx3 Mus musculus ENSMUSG00000030189 I 0.785
Myotis_brandtii_YBX1_10016780 Myotis brandtii Myotis_brandtii_YBX1_10016780 I 0.708
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.785
ENSNLEG00000008063 Nomascus leucogenys ENSNLEG00000008063 I 0.785
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.785
Ogr10632 Ophisaurus gracilis Ogr10632 I 0.769
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.785
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.785
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.785
ybx1 Oryzias latipes ENSORLG00000004225 I 0.785
ENSOGAG00000027853 Otolemur garnettii ENSOGAG00000027853 I 0.708
ENSOGAG00000032929 Otolemur garnettii ENSOGAG00000032929 I 0.738
YBX3 Otolemur garnettii ENSOGAG00000013245 I 0.712
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.785
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.785
ENSOGAG00000034677 Otolemur garnettii ENSOGAG00000034677 I 0.708
ENSOGAG00000014939 Otolemur garnettii ENSOGAG00000014939 I 0.708
ENSOARG00000011562 Ovis aries ENSOARG00000011562 I 0.785
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.785
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.785
YBX3 Pan troglodytes ENSPTRG00000004681 I 0.720
YBX1 Pan troglodytes ENSPTRG00000006456 I 0.754
YBX2 Pan troglodytes ENSPTRG00000008673 I 0.758
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.754
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.785
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.785
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.738
ENSPANG00000024250 Papio anubis ENSPANG00000024250 I 0.785
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.785
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.785
ENSPSIG00000012364 Pelodiscus sinensis ENSPSIG00000012364 I 0.785
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.785
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.785
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.785
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.785
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.708
YBX2 Procavia capensis ENSPCAG00000008019 I 0.785
YBX3 Procavia capensis ENSPCAG00000001397 I 0.769
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.785
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.785
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.785
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.785
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.785
LOC100912427 Rattus norvegicus ENSRNOG00000032902 I 0.738
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.723
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.785
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.769
YBX2 Sorex araneus ENSSARG00000000488 I 0.769
ENSSSCG00000015308 Sus scrofa ENSSSCG00000015308 I 0.723
YBX3 Sus scrofa ENSSSCG00000000633 I 0.785
ENSSSCG00000030357 Sus scrofa ENSSSCG00000030357 I 0.785
ENSSSCG00000008860 Sus scrofa ENSSSCG00000008860 I 0.727
YBX2 Sus scrofa ENSSSCG00000017938 I 0.785
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.785
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.785
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.785
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.785
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.785
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.785
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.723
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.708
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.785
ybx1.S Xenopus laevis XB-GENE-865405 I 0.785
AAH42217 Xenopus laevis AAH42217 I 0.785
AAI30161 Xenopus laevis AAI30161 I 0.785
CAA42778 Xenopus laevis CAA42778 I 0.785
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.754
ybx2.L Xenopus laevis XB-GENE-6252609 I 0.769
ybx2 Xenopus tropicalis XB-GENE-5798907 I 0.769
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.785
ybx3 Xenopus tropicalis XB-GENE-1007558 I 0.727
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.785