ENSCJAG00000018092 (Callithrix jacchus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSCJAG00000018092 T164477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.803 0.803
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.803 0.803
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.803 0.803
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.803 0.803
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000033424 CSD 62 130

Links

Other CSD family TFs
Other Callithrix jacchus TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.000
Ca_21400 Cicer arietinum Ca_21400 I 0.000
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I 0.000
Cla008712 Citrullus lanatus Cla008712 I 0.000
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.000
Eucgr.J00701 Eucalyptus grandis Eucgr.J00701 I 0.000
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.000
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.000
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.000
GLYMA08G41330 Glycine max GLYMA08G41330 I 0.000
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.000
GLYMA18G14910 Glycine max GLYMA18G14910 I 0.000
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.000
MDP0000207866 Malus domestica MDP0000207866 I 0.000
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.000
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.000
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I 0.000
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.000
PK25011.1 Cannabis sativa PK25011.1 D 0.000
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.000
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I 0.000
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.000