YBX2 (Felis catus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSFCAG00000018097 T164559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.985 0.985
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.985 0.985
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.985 0.985
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.985 0.985
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN

NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.803 0.803
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD

HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000015549 CSD 4 73

Links

Other CSD family TFs
Other Felis catus TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G61960 Arabidopsis thaliana AT1G61960 N 0.000
AT1G62085 Arabidopsis thaliana AT1G62085 N 0.000
AT3G46950 Arabidopsis thaliana AT3G46950 N 0.000
Bo3g134070 Brassica oleracea Bo3g134070 N 0.000
Bo9g040760 Brassica oleracea Bo9g040760 N 0.000
Bostr.22157s0123 Boechera stricta Bostr.22157s0123 I 0.000
Bostr.22157s0159 Boechera stricta Bostr.22157s0159 N 0.000
Bostr.22157s0168 Boechera stricta Bostr.22157s0168 N 0.000
Bostr.22157s0170 Boechera stricta Bostr.22157s0170 N 0.000
Bra018182 Brassica rapa Bra018182 N 0.000
Cagra.0448s0035 Capsella grandiflora Cagra.0448s0035 N 0.000
Carubv10018684m.g Capsella rubella Carubv10018684m.g N 0.000
Carubv10020262m.g Capsella rubella Carubv10020262m.g N 0.000
Carubv10020267m.g Capsella rubella Carubv10020267m.g N 0.000
fgenesh2_kg.5__1064__AT3G46950.1 Arabidopsis lyrata fgenesh2_kg.5__1064__AT3G46950.1 N 0.000
Thhalv10022427m.g Eutrema salsugineum Thhalv10022427m.g N 0.000