YBX3 (Oryctolagus cuniculus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOCUG00000001889 T164681_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.820 0.820
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.820 0.820
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.820 0.820
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000019910 CSD 70 134

Links

Other CSD family TFs
Other Oryctolagus cuniculus TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CENPB Tursiops truncatus ENSTTRG00000009462 I 0.000
Cenpb Rattus norvegicus ENSRNOG00000057284 I 0.000
CENPB Pan troglodytes ENSPTRG00000028950 I 0.000
CENPB Procavia capensis ENSPCAG00000008643 I 0.000
CENPB Otolemur garnettii ENSOGAG00000034679 I 0.000
CENPB Ornithorhynchus anatinus ENSOANG00000002467 I 0.000
Cenpb Mus musculus ENSMUSG00000068267 I 0.000
CENPB Monodelphis domestica ENSMODG00000015345 I 0.000
CENPB Homo sapiens ENSG00000125817 D 0.000
Cenpb Dipodomys ordii ENSDORG00000003851 I 0.000
ENSCSAG00000018760 Chlorocebus sabaeus ENSCSAG00000018760 I 0.000
ENSNLEG00000018556 Nomascus leucogenys ENSNLEG00000018556 I 0.000
ENSPANG00000018561 Papio anubis ENSPANG00000018561 I 0.000
ENSSTOG00000024375 Ictidomys tridecemlineatus ENSSTOG00000024375 I 0.000