ENSOCUG00000011640 (Oryctolagus cuniculus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOCUG00000011640 T164682_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.766 0.766
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000019197 CSD 33 96

Links

Other CSD family TFs
Other Oryctolagus cuniculus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R006709 Buceros rhinoceros Brh_R006709 I 0.973
ENSTGUG00000001037 Taeniopygia guttata ENSTGUG00000001037 I 0.973
Afo_R008930 Aptenodytes forsteri Afo_R008930 I 0.973
Gfo_R011576 Geospiza fortis Gfo_R011576 I 0.973
ENSACAG00000017764 Anolis carolinensis ENSACAG00000017764 I 0.973
Ogr09706 Ophisaurus gracilis Ogr09706 I 0.946
LIN28B Myotis lucifugus ENSMLUG00000006883 I 0.919
LIN28B Bos taurus ENSBTAG00000043973 I 0.919
LIN28A Homo sapiens ENSG00000131914 I 0.828
LIN28A Pan troglodytes ENSPTRG00000000384 I 0.828
LIN28A Felis catus ENSFCAG00000012810 I 0.828
ENSP00000254231 Macaca fascicularis ENSP00000254231 I 0.828
Lin28a Rattus norvegicus ENSRNOG00000060320 I 0.828
Lin28a Mus musculus ENSMUSG00000050966 I 0.828
LIN28A Otolemur garnettii ENSOGAG00000003971 I 0.828
ENSOCUG00000027473 Oryctolagus cuniculus ENSOCUG00000027473 I 0.828
LIN28A Gorilla gorilla ENSGGOG00000024918 I 0.828
ENSNLEG00000009294 Nomascus leucogenys ENSNLEG00000009294 I 0.828
ENSMLUG00000010158 Myotis lucifugus ENSMLUG00000010158 I 0.828
LIN28A Ochotona princeps ENSOPRG00000001591 I 0.828
ENSMPUG00000015724 Mustela putorius furo ENSMPUG00000015724 I 0.828
ENSMEUG00000008743 Macropus eugenii ENSMEUG00000008743 I 0.828
ENSPANG00000009841 Papio anubis ENSPANG00000009841 I 0.828
LIN28A Equus caballus ENSECAG00000020267 I 0.828
ENSBTAP00000004196-D2 Bos grunniens ENSBTAP00000004196-D2 I 0.828
LIN28A Loxodonta africana ENSLAFG00000017525 I 0.828
ENSPPYG00000001684 Pongo abelii ENSPPYG00000001684 I 0.828
LIN28A Pteropus vampyrus ENSPVAG00000017267 I 0.828
ENSOCUG00000027786 Oryctolagus cuniculus ENSOCUG00000027786 I 0.828
LIN28A Tursiops truncatus ENSTTRG00000005678 I 0.828
ENSVPAG00000008073 Vicugna pacos ENSVPAG00000008073 I 0.828
ENSOCUG00000000299 Oryctolagus cuniculus ENSOCUG00000000299 I 0.828
LIN28A Canis familiaris ENSCAFG00000012488 I 0.828
ENSBTAG00000040497 Bos taurus ENSBTAG00000040497 I 0.828
ENSTSYG00000011513 Tarsius syrichta ENSTSYG00000011513 I 0.828
ENSAMEG00000010582 Ailuropoda melanoleuca ENSAMEG00000010582 I 0.828
LIN28A Callithrix jacchus ENSCJAG00000009796 I 0.828
ENSOARG00000004614 Ovis aries ENSOARG00000004614 I 0.828
LIN28A Sus scrofa ENSSSCG00000003557 I 0.828
Myotis_brandtii_Lin28a_10029661 Myotis brandtii Myotis_brandtii_Lin28a_10029661 I 0.828
ENSSTOG00000004329 Ictidomys tridecemlineatus ENSSTOG00000004329 I 0.828
ENSCSAG00000000975 Chlorocebus sabaeus ENSCSAG00000000975 I 0.828
LIN28A Dasypus novemcinctus ENSDNOG00000010710 I 0.828
Alligator_sinensis_CCG010967.1 Alligator sinensis Alligator_sinensis_CCG010967.1 I 0.812
Cmyd_10009744 Chelonia mydas Cmyd_10009744 I 0.812
LIN28A Monodelphis domestica ENSMODG00000014236 I 0.803
LIN28A Meleagris gallopavo ENSMGAG00000009456 I 0.797
Pvit_17184 Pogona vitticeps Pvit_17184 I 0.797
ENSGALG00000000388 Gallus gallus ENSGALG00000000388 I 0.797
Aan_R005866 Calypte anna Aan_R005866 I 0.797
ENSFALG00000000374 Ficedula albicollis ENSFALG00000000374 I 0.797
yakG040859 Bos grunniens yakG040859 I 0.788
ENSBTAG00000048256 Bos taurus ENSBTAG00000048256 I 0.788
ENSCPOG00000024027 Cavia porcellus ENSCPOG00000024027 I 0.788
ENSPFOG00000014054 Poecilia formosa ENSPFOG00000014054 I 0.781
ENSLOCG00000003353 Lepisosteus oculatus ENSLOCG00000003353 I 0.781
ENSLACG00000004053 Latimeria chalumnae ENSLACG00000004053 I 0.781
ENSCJAG00000022770 Callithrix jacchus ENSCJAG00000022770 I 0.773
ENSOARG00000003913 Ovis aries ENSOARG00000003913 I 0.769
LIN28B Otolemur garnettii ENSOGAG00000011042 I 0.766
LIN28B Pan troglodytes ENSPTRG00000018453 I 0.766
ENSSSCG00000004365 Sus scrofa ENSSSCG00000004365 I 0.766
ENSTSYG00000006480 Tarsius syrichta ENSTSYG00000006480 I 0.766
LIN28B Tursiops truncatus ENSTTRG00000014919 I 0.766
LIN28B Sorex araneus ENSSARG00000008374 I 0.766
LIN28B Pteropus vampyrus ENSPVAG00000008797 I 0.766
ENSPANG00000005196 Papio anubis ENSPANG00000005196 I 0.766
ENSPPYG00000016875 Pongo abelii ENSPPYG00000016875 I 0.766
LIN28B Ochotona princeps ENSOPRG00000006333 I 0.766
ENSMICG00000002297 Microcebus murinus ENSMICG00000002297 I 0.766
LIN28B Erinaceus europaeus ENSEEUG00000003632 I 0.766
LIN28B Equus caballus ENSECAG00000020994 I 0.766
LIN28B Felis catus ENSFCAG00000005058 I 0.766
LIN28B Homo sapiens ENSG00000187772 D 0.766
si:ch1073-284b18.2 Gasterosteus aculeatus ENSGACG00000013893 I 0.766
LIN28B Dasypus novemcinctus ENSDNOG00000015300 I 0.766
LIN28B Callithrix jacchus ENSCJAG00000001671 I 0.766
ENSAMEG00000011453 Ailuropoda melanoleuca ENSAMEG00000011453 I 0.766
ENSAMXG00000001573 Astyanax mexicanus ENSAMXG00000001573 I 0.766
LIN28B Canis familiaris ENSCAFG00000003598 I 0.766
LIN28B Choloepus hoffmanni ENSCHOG00000001682 I 0.766
LIN28B Gallus gallus ENSGALG00000026761 I 0.766
ENSMMUP00000018998 Macaca fascicularis ENSMMUP00000018998 I 0.766
ENSMPUG00000009489 Mustela putorius furo ENSMPUG00000009489 I 0.766
ENSNLEG00000014146 Nomascus leucogenys ENSNLEG00000014146 I 0.766
LIN28B Gorilla gorilla ENSGGOG00000015437 I 0.766
LIN28B Macaca mulatta ENSMMUG00000014470 I 0.766
ENSXMAG00000014593 Xiphophorus maculatus ENSXMAG00000014593 I 0.766
ENSBTAP00000053651-D1 Bos grunniens ENSBTAP00000053651-D1 I 0.766
ENSOARG00000011404 Ovis aries ENSOARG00000011404 I 0.766
LIN28B Loxodonta africana ENSLAFG00000017788 I 0.766
LIN28B Anolis carolinensis ENSACAG00000003957 I 0.766
si:ch1073-284b18.2 Takifugu rubripes ENSTRUG00000006069 I 0.758
ENSONIG00000016204 Oreochromis niloticus ENSONIG00000016204 I 0.754
Lin28b Rattus norvegicus ENSRNOG00000025938 I 0.750
Lin28b Mus musculus ENSMUSG00000063804 I 0.750
ENSSTOG00000002692 Ictidomys tridecemlineatus ENSSTOG00000002692 I 0.750
Myotis_brandtii_LIN28B_10034705 Myotis brandtii Myotis_brandtii_LIN28B_10034705 I 0.745
ENSCSAG00000014708 Chlorocebus sabaeus ENSCSAG00000014708 I 0.745
LIN28B Oryctolagus cuniculus ENSOCUG00000017850 I 0.745
lin28a Xenopus tropicalis XB-GENE-491384 I 0.742
Afo_R003680 Aptenodytes forsteri Afo_R003680 I 0.742
Gfo_R012200 Geospiza fortis Gfo_R012200 I 0.742
Pvit_09294 Pogona vitticeps Pvit_09294 I 0.742
Aan_R007025 Calypte anna Aan_R007025 I 0.742
LIN28B Ornithorhynchus anatinus ENSOANG00000010299 I 0.742
LIN28B Monodelphis domestica ENSMODG00000018035 I 0.742
ENSLACG00000002747 Latimeria chalumnae ENSLACG00000002747 I 0.742
ENSFALG00000011574 Ficedula albicollis ENSFALG00000011574 I 0.742
ENSAPLG00000014264 Anas platyrhynchos ENSAPLG00000014264 I 0.742
si:ch1073-284b18.2 Oryzias latipes ENSORLG00000014369 I 0.742
LIN28B Echinops telfairi ENSETEG00000015340 I 0.742
LIN28B Taeniopygia guttata ENSTGUG00000012225 I 0.742
ENSPSIG00000002635 Pelodiscus sinensis ENSPSIG00000002635 I 0.742
ENSCJAG00000021979 Callithrix jacchus ENSCJAG00000021979 I 0.734
lin28a.S Xenopus laevis XB-GENE-866059 I 0.734
LIN28B Cavia porcellus ENSCPOG00000006178 I 0.727
lin28a Danio rerio ENSDARG00000016999 I 0.727
ENSGMOG00000015660 Gadus morhua ENSGMOG00000015660 I 0.723
LIN28A Danio rerio ENSDARG00000004328 I 0.723
ENSGMOG00000015523 Gadus morhua ENSGMOG00000015523 I 0.719
ENSAMXG00000001433 Astyanax mexicanus ENSAMXG00000001433 I 0.712
lin28b Xenopus tropicalis XB-GENE-1218969 I 0.712
LIN28B Tetraodon nigroviridis ENSTNIG00000012302 I 0.712
lin28b Danio rerio ENSDARG00000052511 I 0.703
Aan_R002277 Calypte anna Aan_R002277 I 0.703
LIN28A Erinaceus europaeus ENSEEUG00000012085 I 0.703
ENSAMXG00000001888 Astyanax mexicanus ENSAMXG00000001888 I 0.703
ENSPFOG00000019352 Poecilia formosa ENSPFOG00000019352 I 0.703