ENSOCUG00000024588 (Oryctolagus cuniculus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOCUG00000024588 T164690_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.975 0.975
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.975 0.975
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.975 0.975
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.975 0.975
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.800 0.800
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.725 0.725
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000023346 CSD 48 91

Links

Other CSD family TFs
Other Oryctolagus cuniculus TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10002115 Chelonia mydas Cmyd_10002115 I 1.000
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 1.000
ENSMLUG00000029452 Myotis lucifugus ENSMLUG00000029452 I 1.000
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.975
ENSOCUG00000021258 Oryctolagus cuniculus ENSOCUG00000021258 I 0.975
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.975
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.975
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.975
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.975
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.975
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.975
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.975
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.975
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.975
ybx1 Oryzias latipes ENSORLG00000004225 I 0.975
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.975
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.975
Ybx1 Mus musculus ENSMUSG00000028639 I 0.975
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.975
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.975
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.975
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.975
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.975
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.975
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.975
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.975
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.975
Ybx3 Mus musculus ENSMUSG00000030189 I 0.975
ENSMPUG00000013922 Mustela putorius furo ENSMPUG00000013922 I 0.975
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.975
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.975
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.975
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.975
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.975
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.975
ENSP00000389639-D2 Bos grunniens ENSP00000389639-D2 I 0.975
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.975
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.975
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.975
AAH42217 Xenopus laevis AAH42217 I 0.975
AAI30161 Xenopus laevis AAI30161 I 0.975
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.975
ybx1.S Xenopus laevis XB-GENE-865405 I 0.975
ybx2.L Xenopus laevis XB-GENE-6252609 I 0.975
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.975
CAA42778 Xenopus laevis CAA42778 I 0.975
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.975
Aan_R014295 Calypte anna Aan_R014295 I 0.975
ENSSTOG00000000116 Ictidomys tridecemlineatus ENSSTOG00000000116 I 0.975
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.975
YBX3 Sus scrofa ENSSSCG00000000633 I 0.975
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.975
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.975
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.975
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.975
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.975
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.975
Aan_R001440 Calypte anna Aan_R001440 I 0.975
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.975
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.975
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.975
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.975
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.975
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.975
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.975
YBX1 Bos taurus ENSBTAG00000017368 I 0.975
YBX3 Bos taurus ENSBTAG00000009663 I 0.975
YBX3 Echinops telfairi ENSETEG00000002557 I 0.975
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.975
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.975
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.975
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.975
YBX3 Canis familiaris ENSCAFG00000013401 I 0.975
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.975
YBX1 Canis familiaris ENSCAFG00000002541 I 0.975
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.975
YBX3 Equus caballus ENSECAG00000013777 I 0.975
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.975
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.975
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.975
YBX1 Homo sapiens ENSG00000065978 D 0.975
ybx1 Danio rerio ENSDARG00000004757 I 0.975
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.975
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.975
YBX1 Gallus gallus ENSGALG00000004848 I 0.975
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.975
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.975
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.975
ENSCSAG00000001168 Chlorocebus sabaeus ENSCSAG00000001168 I 0.975
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.975
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.975
YBX3 Felis catus ENSFCAG00000027748 I 0.975
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.975
YBX3 Homo sapiens ENSG00000060138 I 0.975
Tal_R003478 Tyto alba Tal_R003478 I 0.973
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.950
ENSCAFG00000017286 Canis familiaris ENSCAFG00000017286 I 0.950
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.950
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 I 0.950
ENSOCUG00000022716 Oryctolagus cuniculus ENSOCUG00000022716 I 0.950
ENSMPUG00000010386 Mustela putorius furo ENSMPUG00000010386 I 0.950
Myotis_brandtii_YBX2_10021025 Myotis brandtii Myotis_brandtii_YBX2_10021025 I 0.950
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.950
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.950
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.950
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.950
YBX2 Microcebus murinus ENSMICG00000012453 I 0.950
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.950
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.950
Alligator_sinensis_CCG014301.1 Alligator sinensis Alligator_sinensis_CCG014301.1 I 0.949
ENSMLUG00000024638 Myotis lucifugus ENSMLUG00000024638 I 0.927
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.925
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.925
ENSCJAG00000033824 Callithrix jacchus ENSCJAG00000033824 I 0.925
YBX2 Sorex araneus ENSSARG00000000488 I 0.925
ENSCJAG00000035120 Callithrix jacchus ENSCJAG00000035120 I 0.925
LotgiG78612 Lottia gigantea LotgiG78612 I 0.925
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.925
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.925
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.925
YBX1 Loxodonta africana ENSLAFG00000031170 I 0.923
CapteG166603 Capitella teleta CapteG166603 I 0.900
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.900
ENSCJAG00000007407 Callithrix jacchus ENSCJAG00000007407 I 0.900
ENSOCUG00000000147 Oryctolagus cuniculus ENSOCUG00000000147 I 0.882
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.881
Cmyd_10000339 Chelonia mydas Cmyd_10000339 I 0.875
ENSOGAG00000014939 Otolemur garnettii ENSOGAG00000014939 I 0.875
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.875
ENSCJAG00000035469 Callithrix jacchus ENSCJAG00000035469 I 0.875
PHUM156710 Pediculus humanus PHUM156710 I 0.850
CLEC013418 Cimex lectularius CLEC013418 I 0.850
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.837
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.830
LOAG_17966 Loa loa LOAG_17966 I 0.825
nAv.1.0.1.g07732 Acanthocheilonema viteae nAv.1.0.1.g07732 I 0.825
nLs.2.1.2.g03745 Litomosoides sigmodontis nLs.2.1.2.g03745 I 0.825
nOo.2.0.1.g01690 Onchocerca ochengi nOo.2.0.1.g01690 I 0.825
MDOA013639 Musca domestica MDOA013639 I 0.825
nDi.2.2.2.g07679 Dirofilaria immitis nDi.2.2.2.g07679 I 0.825
D918_04890 Trichuris suis D918_04890 I 0.825
GPUH_0001124501 Gongylonema pulchrum GPUH_0001124501 I 0.825
EEL_0000726801 Elaeophora elaphi EEL_0000726801 I 0.825
WUBG_03960 Wuchereria bancrofti WUBG_03960 I 0.825
DME_0000984901 Dracunculus medinensis DME_0000984901 I 0.825
Bm3781 Brugia malayi Bm3781 I 0.825
RPRC001993 Rhodnius prolixus RPRC001993 I 0.825
WBGene00247949 Onchocerca volvulus WBGene00247949 I 0.825
ENSSTOG00000026413 Ictidomys tridecemlineatus ENSSTOG00000026413 I 0.825
ENSSTOG00000027979 Ictidomys tridecemlineatus ENSSTOG00000027979 I 0.825
ENSOGAG00000024681 Otolemur garnettii ENSOGAG00000024681 I 0.825
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.825
ENSCAFG00000016523 Canis familiaris ENSCAFG00000016523 I 0.825
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I 0.825
ENSCAFG00000016520 Canis familiaris ENSCAFG00000016520 I 0.825
ENSSTOG00000022212 Ictidomys tridecemlineatus ENSSTOG00000022212 I 0.825
ENSOGAG00000030653 Otolemur garnettii ENSOGAG00000030653 I 0.825
ENSMPUG00000018977 Mustela putorius furo ENSMPUG00000018977 I 0.825
ENSOCUG00000028047 Oryctolagus cuniculus ENSOCUG00000028047 I 0.812
Gfo_R009480 Geospiza fortis Gfo_R009480 I 0.812
Brh_R010004 Buceros rhinoceros Brh_R010004 I 0.812
Tal_R011198 Tyto alba Tal_R011198 I 0.812
Afo_R006672 Aptenodytes forsteri Afo_R006672 I 0.812
ENSFCAG00000022604 Felis catus ENSFCAG00000022604 I 0.812
LDEC002142 Leptinotarsa decemlineata LDEC002142 I 0.800
AALB005039 Anopheles albimanus AALB005039 I 0.800
ENSSARG00000012628 Sorex araneus ENSSARG00000012628 I 0.800
ENSOGAG00000030360 Otolemur garnettii ENSOGAG00000030360 I 0.800
AGAP006108 Anopheles gambiae AGAP006108 I 0.800
AARA007412 Anopheles arabiensis AARA007412 I 0.800
ENSOGAG00000032929 Otolemur garnettii ENSOGAG00000032929 I 0.800
nRc.2.0.1.g10725 Romanomermis culicivorax nRc.2.0.1.g10725 I 0.800
CapteG48958 Capitella teleta CapteG48958 I 0.800
ENSAMEG00000015874 Ailuropoda melanoleuca ENSAMEG00000015874 I 0.800
AMEC011905 Anopheles melas AMEC011905 I 0.800
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.800
AMEM010049 Anopheles merus AMEM010049 I 0.800
AMIN009954 Anopheles minimus AMIN009954 I 0.800
ASTEI02878 Anopheles stephensi ASTEI02878 I 0.800
AQUA011660 Anopheles quadriannulatus AQUA011660 I 0.800
ACHR003797 Anopheles christyi ACHR003797 I 0.800
AFUN005441 Anopheles funestus AFUN005441 I 0.800
ACOM024661 Anopheles coluzzii ACOM024661 I 0.800
CapteG105284 Capitella teleta CapteG105284 I 0.800
ACUA007180 Anopheles culicifacies ACUA007180 I 0.800
AEPI000589 Anopheles epiroticus AEPI000589 I 0.800
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.796
YBX3 Myotis lucifugus ENSMLUG00000007476 I 0.796
ENSSTOG00000002108 Ictidomys tridecemlineatus ENSSTOG00000002108 I 0.796
Ogr02658 Ophisaurus gracilis Ogr02658 I 0.796
Myotis_brandtii_YBX1_10016780 Myotis brandtii Myotis_brandtii_YBX1_10016780 I 0.792
ENSMEUG00000009893 Macropus eugenii ENSMEUG00000009893 I 0.784
YBX3 Pan troglodytes ENSPTRG00000004681 I 0.780
L892_g19487 Steinernema scapterisci L892_g19487 I 0.775
L596_g21676 Steinernema carpocapsae L596_g21676 I 0.775
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.775
L893_g29692 Steinernema glaseri L893_g29692 I 0.775
HelroG133388 Helobdella robusta HelroG133388 I 0.775
KGM_01291 Danaus plexippus KGM_01291 I 0.775
CapteG58124 Capitella teleta CapteG58124 I 0.775
ENSOGAG00000031268 Otolemur garnettii ENSOGAG00000031268 I 0.775
HHAL001434-PA Halyomorpha halys HHAL001434-PA I 0.775
ENSGGOG00000023840 Gorilla gorilla ENSGGOG00000023840 I 0.775
T265_06248 Opisthorchis viverrini T265_06248 I 0.775
CapteG121832 Capitella teleta CapteG121832 I 0.765
TRE_0001884901 Trichobilharzia regenti TRE_0001884901 I 0.750
SSTP_0000685800 Strongyloides stercoralis SSTP_0000685800 I 0.750
PTRK_0000206200 Parastrongyloides trichosuri PTRK_0000206200 I 0.750
SPAL_0000982100 Strongyloides papillosus SPAL_0000982100 I 0.750
ENSAMEG00000008685 Ailuropoda melanoleuca ENSAMEG00000008685 I 0.750
Hba_02103 Heterorhabditis bacteriophora Hba_02103 I 0.750
SVE_1573400 Strongyloides venezuelensis SVE_1573400 I 0.750
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.745
Pvit_07856 Pogona vitticeps Pvit_07856 I 0.731
YBX3 Vicugna pacos ENSVPAG00000000876 I 0.725
OESDEN_18169 Oesophagostomum dentatum OESDEN_18169 I 0.725
NECAME_15956 Necator americanus NECAME_15956 I 0.725
NBR_0000795701 Nippostrongylus brasiliensis NBR_0000795701 I 0.725
MhA1_Contig2458.frz3.gene1 Meloidogyne hapla MhA1_Contig2458.frz3.gene1 I 0.725
ACOC_0000576201 Angiostrongylus costaricensis ACOC_0000576201 I 0.725
RSKR_0000861200 Rhabditophanes kr3021 RSKR_0000861200 I 0.725
SBAD_0000071701 Soboliphyme baturini SBAD_0000071701 I 0.725
TELCIR_06115 Teladorsagia circumcincta TELCIR_06115 I 0.725
ENSORLG00000018683 Oryzias latipes ENSORLG00000018683 I 0.725
ENSPPYG00000001466 Pongo abelii ENSPPYG00000001466 I 0.725
SVUK_0001307901 Strongylus vulgaris SVUK_0001307901 I 0.725
CpipJ_CPIJ002248 Culex pipiens CpipJ_CPIJ002248 I 0.725
cey-1 Caenorhabditis elegans WBGene00000472 D 0.725
ML01365a Mnemiopsis leidyi ML01365a I 0.725
DICVIV_10680 Dictyocaulus viviparus DICVIV_10680 I 0.725
Minc12652 Meloidogyne incognita Minc12652 I 0.725
ACAC_0000909201 Angiostrongylus cantonensis ACAC_0000909201 I 0.725
ANCDUO_02786 Ancylostoma duodenale ANCDUO_02786 I 0.725
ANCCAN_14498 Ancylostoma caninum ANCCAN_14498 I 0.725
ANCCEY_03875 Ancylostoma ceylanicum ANCCEY_03875 I 0.725
genemark-nMf.1.1.scaf00296-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00296-processed-gene-0.4 I 0.725
CapteG50229 Capitella teleta CapteG50229 I 0.725
CPIJ002248 Culex quinquefasciatus CPIJ002248 I 0.725
HPBE_0000695301 Heligmosomoides bakeri HPBE_0000695301 I 0.725
ENSMICG00000004602 Microcebus murinus ENSMICG00000004602 I 0.725
ENSFALG00000010305 Ficedula albicollis ENSFALG00000010305 I 0.722
SINV21160 Solenopsis invicta SINV21160 I 0.702
CJA05984 Caenorhabditis japonica CJA05984 I 0.700
Ybx2 Dipodomys ordii ENSDORG00000010882 I 0.700
ENSOARG00000004633 Ovis aries ENSOARG00000004633 I 0.700
YBX2 Tursiops truncatus ENSTTRG00000009780 I 0.700
ENSBTAG00000045616 Bos taurus ENSBTAG00000045616 I 0.700
YBX2 Echinops telfairi ENSETEG00000014271 I 0.700
DME_0000374801 Dracunculus medinensis DME_0000374801 N 0.700
nLs.2.1.2.g07567 Litomosoides sigmodontis nLs.2.1.2.g07567 N 0.700