YBX2 (Pan troglodytes)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSPTRG00000008673 T164763_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.970 0.970
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.970 0.970
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.970 0.970
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.970 0.970
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN

NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.803 0.803
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD

HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000014791 CSD 95 164

Links

Other CSD family TFs
Other Pan troglodytes TFs

354 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TVAG_018710 Trichomonas vaginalis TVAG_018710 N 0.000
TVAG_339550 Trichomonas vaginalis TVAG_339550 N 0.000
TVAG_368830 Trichomonas vaginalis TVAG_368830 N 0.000
TVAG_377390 Trichomonas vaginalis TVAG_377390 N 0.000
TVAG_390680 Trichomonas vaginalis TVAG_390680 N 0.000
TVAG_420680 Trichomonas vaginalis TVAG_420680 N 0.000
TVAG_437560 Trichomonas vaginalis TVAG_437560 N 0.000
TVAG_449400 Trichomonas vaginalis TVAG_449400 N 0.000
TVAG_454720 Trichomonas vaginalis TVAG_454720 N 0.000
TVAG_466180 Trichomonas vaginalis TVAG_466180 N 0.000
TVAG_467150 Trichomonas vaginalis TVAG_467150 N 0.000
TVAG_485780 Trichomonas vaginalis TVAG_485780 N 0.000
TVAG_524830 Trichomonas vaginalis TVAG_524830 N 0.000
TVAG_571170 Trichomonas vaginalis TVAG_571170 N 0.000
TVAG_578010 Trichomonas vaginalis TVAG_578010 N 0.000
TVAG_579390 Trichomonas vaginalis TVAG_579390 N 0.000
TVAG_583970 Trichomonas vaginalis TVAG_583970 N 0.000
TVAG_591630 Trichomonas vaginalis TVAG_591630 N 0.000
TVAG_338810 Trichomonas vaginalis TVAG_338810 N 0.000
TVAG_330350 Trichomonas vaginalis TVAG_330350 N 0.000
TVAG_322890 Trichomonas vaginalis TVAG_322890 N 0.000
TVAG_029370 Trichomonas vaginalis TVAG_029370 N 0.000
TVAG_033780 Trichomonas vaginalis TVAG_033780 N 0.000
TVAG_048400 Trichomonas vaginalis TVAG_048400 N 0.000
TVAG_067570 Trichomonas vaginalis TVAG_067570 N 0.000
TVAG_071510 Trichomonas vaginalis TVAG_071510 N 0.000
TVAG_164660 Trichomonas vaginalis TVAG_164660 N 0.000
TVAG_170740 Trichomonas vaginalis TVAG_170740 N 0.000
TVAG_175940 Trichomonas vaginalis TVAG_175940 N 0.000
TVAG_202360 Trichomonas vaginalis TVAG_202360 N 0.000
TVAG_214740 Trichomonas vaginalis TVAG_214740 N 0.000
TVAG_256400 Trichomonas vaginalis TVAG_256400 N 0.000
TVAG_284820 Trichomonas vaginalis TVAG_284820 N 0.000
TVAG_300100 Trichomonas vaginalis TVAG_300100 N 0.000
TVAG_304870 Trichomonas vaginalis TVAG_304870 N 0.000
TVAG_318500 Trichomonas vaginalis TVAG_318500 N 0.000
TVAG_321990 Trichomonas vaginalis TVAG_321990 N 0.000
TVAG_322240 Trichomonas vaginalis TVAG_322240 N 0.000
TVAG_602440 Trichomonas vaginalis TVAG_602440 N 0.000