YBX2 (Pan troglodytes)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSPTRG00000008673 T164763_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.970 0.970
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.970 0.970
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.970 0.970
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.970 0.970
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN

NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.803 0.803
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD

HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000014791 CSD 95 164

Links

Other CSD family TFs
Other Pan troglodytes TFs

354 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFP69 Homo sapiens ENSG00000187815 D 0.000
ZFP69 Otolemur garnettii ENSOGAG00000009257 I 0.000
ENSPANG00000006664 Papio anubis ENSPANG00000006664 I 0.000
ENSPPYG00000001488 Pongo abelii ENSPPYG00000001488 I 0.000
ZFP69 Pan troglodytes ENSPTRG00000000591 I 0.000
ZFP69 Pteropus vampyrus ENSPVAG00000010052 I 0.000
ZFP69 Sorex araneus ENSSARG00000003615 I 0.000
ZFP69 Bos taurus ENSBTAG00000039287 I 0.000
ZFP69B Sus scrofa ENSSSCG00000003981 I 0.000
ENSSSCG00000020933 Sus scrofa ENSSSCG00000020933 I 0.000
ENSSTOG00000009229 Ictidomys tridecemlineatus ENSSTOG00000009229 I 0.000
ZFP69 Tupaia belangeri ENSTBEG00000015175 I 0.000
ZFP69 Tursiops truncatus ENSTTRG00000012944 I 0.000
ZFP69 Vicugna pacos ENSVPAG00000003028 I 0.000
ENSP00000361791-D1 Bos grunniens ENSP00000361791-D1 I 0.000
ZFP69 Oryctolagus cuniculus ENSOCUG00000016000 I 0.000
ENSOARG00000020260 Ovis aries ENSOARG00000020260 I 0.000
ZFP69 Choloepus hoffmanni ENSCHOG00000009413 I 0.000
ZFP69 Callithrix jacchus ENSCJAG00000002953 I 0.000
ENSCSAG00000001149 Chlorocebus sabaeus ENSCSAG00000001149 I 0.000
ZFP69 Dasypus novemcinctus ENSDNOG00000007479 I 0.000
ENSDORG00000003572 Dipodomys ordii ENSDORG00000003572 I 0.000
ZFP69 Equus caballus ENSECAG00000022039 I 0.000
ZFP69 Felis catus ENSFCAG00000026784 I 0.000
ZFP69 Gorilla gorilla ENSGGOG00000006972 I 0.000
ZFP69 Microcebus murinus ENSMICG00000007201 I 0.000
ZFP69 Macaca mulatta ENSMMUG00000016199 I 0.000
ENSMPUG00000014134 Mustela putorius furo ENSMPUG00000014134 I 0.000
Zfp69 Mus musculus ENSMUSG00000064141 I 0.000
ENSNLEG00000012184 Nomascus leucogenys ENSNLEG00000012184 I 0.000
ENSP00000361791 Macaca fascicularis ENSP00000361791 I 0.000