ENSSHAG00000012434 (Sarcophilus harrisii)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSSHAG00000012434 T164784_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.968 0.968
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.968 0.968
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000014565 CSD 49 86

Links

Other CSD family TFs
Other Sarcophilus harrisii TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LIN28B Sorex araneus ENSSARG00000008374 I 0.968
LIN28B Gorilla gorilla ENSGGOG00000015437 I 0.968
ENSPPYG00000016875 Pongo abelii ENSPPYG00000016875 I 0.968
LIN28B Loxodonta africana ENSLAFG00000017788 I 0.968
ENSMPUG00000009489 Mustela putorius furo ENSMPUG00000009489 I 0.968
LIN28B Tursiops truncatus ENSTTRG00000014919 I 0.968
LIN28B Dasypus novemcinctus ENSDNOG00000015300 I 0.968
ENSNLEG00000014146 Nomascus leucogenys ENSNLEG00000014146 I 0.968
LIN28B Felis catus ENSFCAG00000005058 I 0.968
LIN28B Homo sapiens ENSG00000187772 D 0.968
ENSSTOG00000002692 Ictidomys tridecemlineatus ENSSTOG00000002692 I 0.968
LIN28B Monodelphis domestica ENSMODG00000018035 I 0.968
LIN28B Pteropus vampyrus ENSPVAG00000008797 I 0.968
LIN28B Pan troglodytes ENSPTRG00000018453 I 0.968
LIN28B Macaca mulatta ENSMMUG00000014470 I 0.968
ENSMMUP00000018998 Macaca fascicularis ENSMMUP00000018998 I 0.968
LIN28B Otolemur garnettii ENSOGAG00000011042 I 0.968
ENSAMEG00000011453 Ailuropoda melanoleuca ENSAMEG00000011453 I 0.968
Pvit_09294 Pogona vitticeps Pvit_09294 I 0.968
ENSPSIG00000002635 Pelodiscus sinensis ENSPSIG00000002635 I 0.968
LIN28B Ochotona princeps ENSOPRG00000006333 I 0.968
Cmyd_10006225 Chelonia mydas Cmyd_10006225 I 0.968
LIN28B Callithrix jacchus ENSCJAG00000001671 I 0.968
ENSMICG00000002297 Microcebus murinus ENSMICG00000002297 I 0.968
LIN28B Choloepus hoffmanni ENSCHOG00000001682 I 0.968
ENSPANG00000005196 Papio anubis ENSPANG00000005196 I 0.968
LIN28B Canis familiaris ENSCAFG00000003598 I 0.968
ENSSSCG00000004365 Sus scrofa ENSSSCG00000004365 I 0.935
ENSTSYG00000006480 Tarsius syrichta ENSTSYG00000006480 I 0.935
LIN28B Equus caballus ENSECAG00000020994 I 0.935
LIN28B Ornithorhynchus anatinus ENSOANG00000010299 I 0.935
LIN28B Vicugna pacos ENSVPAG00000011202 N 0.935
ENSBTAP00000053651-D1 Bos grunniens ENSBTAP00000053651-D1 I 0.935
ENSOARG00000011404 Ovis aries ENSOARG00000011404 I 0.935
LIN28B Echinops telfairi ENSETEG00000015340 I 0.935
ENSLACG00000004053 Latimeria chalumnae ENSLACG00000004053 I 0.903
LIN28B Anolis carolinensis ENSACAG00000003957 I 0.903
LIN28B Erinaceus europaeus ENSEEUG00000003632 I 0.903
LIN28B Gallus gallus ENSGALG00000026761 I 0.871
ENSPFOG00000014054 Poecilia formosa ENSPFOG00000014054 I 0.839
ENSLOCG00000003353 Lepisosteus oculatus ENSLOCG00000003353 I 0.839
Aan_R002277 Calypte anna Aan_R002277 I 0.839
ENSCPOG00000019646 Cavia porcellus ENSCPOG00000019646 N 0.806
Alligator_sinensis_CCG010967.1 Alligator sinensis Alligator_sinensis_CCG010967.1 I 0.806
lin28a Danio rerio ENSDARG00000016999 I 0.806
ENSXMAG00000014593 Xiphophorus maculatus ENSXMAG00000014593 I 0.806
ENSPFOG00000019352 Poecilia formosa ENSPFOG00000019352 I 0.806
LIN28A Ochotona princeps ENSOPRG00000001591 I 0.774
ENSPPYG00000001684 Pongo abelii ENSPPYG00000001684 I 0.774
ENSPANG00000009841 Papio anubis ENSPANG00000009841 I 0.774
ENSSTOG00000004329 Ictidomys tridecemlineatus ENSSTOG00000004329 I 0.774
ENSXMAG00000003450 Xiphophorus maculatus ENSXMAG00000003450 I 0.774
ENSVPAG00000008073 Vicugna pacos ENSVPAG00000008073 I 0.774
Cmyd_10009744 Chelonia mydas Cmyd_10009744 I 0.774
ENSBTAP00000004196-D2 Bos grunniens ENSBTAP00000004196-D2 I 0.774
Myotis_brandtii_Lin28a_10029661 Myotis brandtii Myotis_brandtii_Lin28a_10029661 I 0.774
ENSP00000254231 Macaca fascicularis ENSP00000254231 I 0.774
LIN28A Tursiops truncatus ENSTTRG00000005678 I 0.774
ENSTSYG00000011513 Tarsius syrichta ENSTSYG00000011513 I 0.774
Lin28a Rattus norvegicus ENSRNOG00000060320 I 0.774
Lin28b Rattus norvegicus ENSRNOG00000025938 I 0.774
LIN28A Sus scrofa ENSSSCG00000003557 I 0.774
ENSONIG00000016204 Oreochromis niloticus ENSONIG00000016204 I 0.774
LIN28B Tetraodon nigroviridis ENSTNIG00000012302 I 0.774
LIN28A Pteropus vampyrus ENSPVAG00000017267 I 0.774
ENSNLEG00000009294 Nomascus leucogenys ENSNLEG00000009294 I 0.774
LIN28A Dasypus novemcinctus ENSDNOG00000010710 I 0.774
lin28b Danio rerio ENSDARG00000052511 I 0.774
ENSCSAG00000000975 Chlorocebus sabaeus ENSCSAG00000000975 I 0.774
LIN28A Equus caballus ENSECAG00000020267 I 0.774
LIN28A Felis catus ENSFCAG00000012810 I 0.774
si:ch1073-284b18.2 Gasterosteus aculeatus ENSGACG00000013893 I 0.774
LIN28A Otolemur garnettii ENSOGAG00000003971 I 0.774
ENSCPOG00000024027 Cavia porcellus ENSCPOG00000024027 I 0.774
LIN28A Callithrix jacchus ENSCJAG00000009796 I 0.774
ENSAMXG00000001888 Astyanax mexicanus ENSAMXG00000001888 I 0.774
ENSAMXG00000001573 Astyanax mexicanus ENSAMXG00000001573 I 0.774
ENSAMEG00000010582 Ailuropoda melanoleuca ENSAMEG00000010582 I 0.774
ENSAMXG00000016813 Astyanax mexicanus ENSAMXG00000016813 I 0.774
ENSBTAG00000040497 Bos taurus ENSBTAG00000040497 I 0.774
LIN28A Choloepus hoffmanni ENSCHOG00000002073 I 0.774
LIN28A Canis familiaris ENSCAFG00000012488 I 0.774
LIN28A Gorilla gorilla ENSGGOG00000024918 I 0.774
LIN28A Homo sapiens ENSG00000131914 I 0.774
Lin28b Mus musculus ENSMUSG00000063804 I 0.774
Lin28a Mus musculus ENSMUSG00000050966 I 0.774
ENSMPUG00000015724 Mustela putorius furo ENSMPUG00000015724 I 0.774
ENSOARG00000004614 Ovis aries ENSOARG00000004614 I 0.774
ENSOCUG00000000299 Oryctolagus cuniculus ENSOCUG00000000299 I 0.774
ENSOCUG00000027786 Oryctolagus cuniculus ENSOCUG00000027786 I 0.774
ENSOCUG00000027473 Oryctolagus cuniculus ENSOCUG00000027473 I 0.774
ENSMEUG00000008743 Macropus eugenii ENSMEUG00000008743 I 0.774
ENSMLUG00000010158 Myotis lucifugus ENSMLUG00000010158 I 0.774
LIN28A Loxodonta africana ENSLAFG00000017525 I 0.774
ENSLOCG00000016539 Lepisosteus oculatus ENSLOCG00000016539 I 0.774
ENSGMOG00000010704 Gadus morhua ENSGMOG00000010704 I 0.774
yakG040859 Bos grunniens yakG040859 I 0.742
Pvit_17184 Pogona vitticeps Pvit_17184 I 0.742
LIN28A Procavia capensis ENSPCAG00000013674 N 0.742
ENSFALG00000000374 Ficedula albicollis ENSFALG00000000374 I 0.742
lin28a Takifugu rubripes ENSTRUG00000009454 I 0.742
ENSGALG00000000388 Gallus gallus ENSGALG00000000388 I 0.742
Aan_R005866 Calypte anna Aan_R005866 I 0.742
LIN28A Danio rerio ENSDARG00000004328 I 0.742
LIN28A Meleagris gallopavo ENSMGAG00000009456 I 0.742
LIN28A Pan troglodytes ENSPTRG00000000384 I 0.742
lin28a.S Xenopus laevis XB-GENE-866059 I 0.710
lin28a Tetraodon nigroviridis ENSTNIG00000009802 I 0.710
ENSCJAG00000016916 Callithrix jacchus ENSCJAG00000016916 I 0.710
ENSBTAG00000048256 Bos taurus ENSBTAG00000048256 I 0.710
ENSGMOG00000015660 Gadus morhua ENSGMOG00000015660 I 0.710
lin28a Gasterosteus aculeatus ENSGACG00000007826 I 0.710