ATGRP2B (Arabidopsis lyrata)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 fgenesh2_kg.4__14__AT2G21060.1 T164910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CSP4
M01902_2.00 		Arabidopsis thaliana
AAWAAAAM
KTTTTWTT		 PBM
Weirauch et al.(2014)
pTH7494 		0.924 0.924
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.4__14__AT2G21060.1 CSD 14 80

Links

Other CSD family TFs
Other Arabidopsis lyrata TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ008120 Culex pipiens CpipJ_CPIJ008120 N 0.000
AEPI000454 Anopheles epiroticus AEPI000454 N 0.000
AFAF016022 Anopheles farauti AFAF016022 N 0.000
AFUN011482 Anopheles funestus AFUN011482 N 0.000
AMAM014999 Anopheles maculatus AMAM014999 N 0.000
AMEC019303 Anopheles melas AMEC019303 N 0.000
AMEM003072 Anopheles merus AMEM003072 N 0.000
AMIN005829 Anopheles minimus AMIN005829 N 0.000
AQUA002447 Anopheles quadriannulatus AQUA002447 N 0.000
ADIR000927 Anopheles dirus ADIR000927 N 0.000
ACUA018382 Anopheles culicifacies ACUA018382 N 0.000
AATE017083 Anopheles atroparvus AATE017083 N 0.000
CpipJ_CPIJ018670 Culex pipiens CpipJ_CPIJ018670 N 0.000
AGAP000876 Anopheles gambiae AGAP000876 N 0.000
BGIBMGA001001 Bombyx mori BGIBMGA001001 N 0.000
CPIJ008120 Culex quinquefasciatus CPIJ008120 N 0.000
CPIJ018670 Culex quinquefasciatus CPIJ018670 N 0.000
HMEL006591 Heliconius melpomene HMEL006591 N 0.000
KGM_17269 Danaus plexippus KGM_17269 N 0.000
AARA002562 Anopheles arabiensis AARA002562 N 0.000
ASTEI01188 Anopheles stephensi ASTEI01188 N 0.000