CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra82063
(
Phytophthora ramorum
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
Phyra82063
T165097_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra82063
CSD
187
248
SQGFVVSIKENFGFVSCMERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVAL
Phyra82063
CSD
407
488
ENGIVDRVKNGGGFIKCCDRPMDVYFPFHEIREPEESDKNDDEQGEGSDKPRRGRQGKSVIREGDEVSFFVYEDQEDDSARP
Phyra82063
CSD
629
690
ETGTINALKEDFGFIKCAERSGDAYFRFSDVMGNSRSFKNGTEVAFDVIADNKSDNIRATRL
Phyra82063
CSD
929
1000
EGFIVSVKSEGFGFIQPALSVPGSMEENLFFHIKEITTGQTLAELKEGTEVQYTIFVDEKKKKNRATGIAVL
Phyra82063
CSD
1123
1156
DIVDPTVVLREGDEVEFISQITAKNPRAAQIRLL
Links
Other
CSD
family TFs
Other
Phytophthora ramorum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.450
Phytophthora lateralis
fgenesh_scip_prom.28083.450
N
0.989
Physo138371
Phytophthora sojae
Physo138371
N
0.874
F443_04436
Phytophthora parasitica
F443_04436
N
0.860
PITG_10442
Phytophthora infestans
PITG_10442
N
0.777