CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s08740
(
Populus trichocarpa
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
POPTR_0002s08740
T165102_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s08740.1
CSD
7
73
STGTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSDGQPVEFSVGSGEDGRAKAADVVGA
Links
Other
CSD
family TFs
Other
Populus trichocarpa
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001162201
Angiostrongylus cantonensis
ACAC_0001162201
N
0.000
ACOC_0000469501
Angiostrongylus costaricensis
ACOC_0000469501
N
0.000
ANCCEY_00676
Ancylostoma ceylanicum
ANCCEY_00676
N
0.000
ASIM_0001399701
Anisakis simplex
ASIM_0001399701
N
0.000
ASU_11774
Ascaris suum
ASU_11774
N
0.000
augustus_masked-nMf.1.1.scaf09310-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf09310-processed-gene-0.0
N
0.000
Bm1901
Brugia malayi
Bm1901
N
0.000
BTMF_0001079001
Brugia timori
BTMF_0001079001
N
0.000
CBG16905
Caenorhabditis briggsae
CBG16905
N
0.000
CBN03169
Caenorhabditis brenneri
CBN03169
N
0.000
CJA09725
Caenorhabditis japonica
CJA09725
N
0.000
CRE24053
Caenorhabditis remanei
CRE24053
N
0.000
DICVIV_00660
Dictyocaulus viviparus
DICVIV_00660
N
0.000
EVEC_0000609201
Enterobius vermicularis
EVEC_0000609201
N
0.000
GPUH_0000212701
Gongylonema pulchrum
GPUH_0000212701
N
0.000
hlh-8
Caenorhabditis elegans
WBGene00001953
N
0.000
HPLM_0001457001
Haemonchus placei
HPLM_0001457001
N
0.000
L596_g5997
Steinernema carpocapsae
L596_g5997
N
0.000
L889_g10347
Steinernema feltiae
L889_g10347
N
0.000
L892_g20046
Steinernema scapterisci
L892_g20046
N
0.000
L893_g10009
Steinernema glaseri
L893_g10009
N
0.000
L898_g8197
Steinernema monticolum
L898_g8197
N
0.000
LOAG_10057
Loa loa
LOAG_10057
N
0.000
nAv.1.0.1.g01810
Acanthocheilonema viteae
nAv.1.0.1.g01810
N
0.000
NBR_0000628901
Nippostrongylus brasiliensis
NBR_0000628901
N
0.000
nDi.2.2.2.g00693
Dirofilaria immitis
nDi.2.2.2.g00693
N
0.000
nDi.2.2.2.g08418
Dirofilaria immitis
nDi.2.2.2.g08418
N
0.000
NECAME_08837
Necator americanus
NECAME_08837
N
0.000
nLs.2.1.2.g08090
Litomosoides sigmodontis
nLs.2.1.2.g08090
N
0.000
nOo.2.0.1.g01703
Onchocerca ochengi
nOo.2.0.1.g01703
N
0.000
OFLC_0000670901
Onchocerca flexuosa
OFLC_0000670901
N
0.000
SMUV_0000034901
Syphacia muris
SMUV_0000034901
N
0.000
TCLT_0000903001
Thelazia callipaeda
TCLT_0000903001
N
0.000
TCNE_0001923701
Toxocara canis
TCNE_0001923701
N
0.000
TELCIR_07838
Teladorsagia circumcincta
TELCIR_07838
N
0.000
TELCIR_11866
Teladorsagia circumcincta
TELCIR_11866
N
0.000
WBGene00245127
Onchocerca volvulus
WBGene00245127
N
0.000
WUBG_09106
Wuchereria bancrofti
WUBG_09106
N
0.000