POPTR_0004s17840 (Populus trichocarpa)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 POPTR_0004s17840 T165103_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s17840.1 CSD 5 71

Links

Other CSD family TFs
Other Populus trichocarpa TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00041p00167350 Amborella trichopoda AMTR_s00041p00167350 N 0.712
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.727
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.742
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.758
Ca_11038 Cicer arietinum Ca_11038 N 0.712
Cla016088 Citrullus lanatus Cla016088 N 0.758
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.758
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.759
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.742
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.788
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.742
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.727
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.773
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.773
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.742
Gorai.008G062500 Gossypium raimondii Gorai.008G062500 N 0.727
LPERR08G02000 Leersia perrieri LPERR08G02000 N 0.712
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.727
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.742
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.742
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.712
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N 0.712
MDP0000225222 Malus domestica MDP0000225222 N 0.727
MDP0000155077 Malus domestica MDP0000155077 N 0.712
MDP0000202739 Malus domestica MDP0000202739 N 0.712
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.833
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.864
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.727
mgf015980m Mimulus guttatus mgf015980m I 0.742
mgf014458m Mimulus guttatus mgf014458m N 0.773
mgf001526m Mimulus guttatus mgf001526m N 0.773
OBART02G01600 Oryza barthii OBART02G01600 N 0.742
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.742
ORGLA08G0012100 Oryza glaberrima ORGLA08G0012100 N 0.712
OGLUM08G01920 Oryza glumaepatula OGLUM08G01920 N 0.712
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.742
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.742
BGIOSGA027713 Oryza indica BGIOSGA027713 N 0.712
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.742
OMERI08G01940 Oryza meridionalis OMERI08G01940 N 0.712
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.758
ONIVA08G01720 Oryza nivara ONIVA08G01720 N 0.712
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.742
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.742
ORUFI08G02050 Oryza rufipogon ORUFI08G02050 N 0.712
OS02G0121100 Oryza sativa OS02G0121100 N 0.742
OS08G0129200 Oryza sativa OS08G0129200 N 0.712
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.788
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.742
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.788
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.924
Pm020837 Prunus mume Pm020837 I 0.758
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.924
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.970
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.727
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.712
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.712
PGSC0003DMG400001591 Solanum tuberosum PGSC0003DMG400001591 N 0.727
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.742
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.788
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.712
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.818
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.742
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.788