POPTR_0009s13460 (Populus trichocarpa)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 POPTR_0009s13460 T165105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s13460.1 CSD 6 72

Links

Other CSD family TFs
Other Populus trichocarpa TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.727
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.742
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.742
mgf015980m Mimulus guttatus mgf015980m I 0.773
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.742
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.803
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.727
Pm020837 Prunus mume Pm020837 I 0.758
Bra031159 Brassica rapa Bra031159 I 0.712
Bra030325 Brassica rapa Bra030325 I 0.712
Bo8g102040 Brassica oleracea Bo8g102040 I 0.712
Bo4g145670 Brassica oleracea Bo4g145670 I 0.712
Cagra.3126s0019 Capsella grandiflora Cagra.3126s0019 N 0.712
mgf001526m Mimulus guttatus mgf001526m N 0.758
mgf014458m Mimulus guttatus mgf014458m N 0.758
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.727
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.742
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.742
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.712
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.712
Carubv10015336m.g Capsella rubella Carubv10015336m.g N 0.712
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.793
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N 0.712
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.742
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.712
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 1.000
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.894
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.727
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.727
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.714
MDP0000225222 Malus domestica MDP0000225222 N 0.727
MDP0000202739 Malus domestica MDP0000202739 N 0.712
MDP0000155077 Malus domestica MDP0000155077 N 0.712
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.742
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.742
Gorai.008G062500 Gossypium raimondii Gorai.008G062500 N 0.712
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.705
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.712
ONIVA08G01720 Oryza nivara ONIVA08G01720 N 0.712
OMERI08G01940 Oryza meridionalis OMERI08G01940 N 0.712
OGLUM08G01920 Oryza glumaepatula OGLUM08G01920 N 0.712
LPERR08G02000 Leersia perrieri LPERR08G02000 N 0.712
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.727
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.727
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.712
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.712
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.727
Bra011655 Brassica rapa Bra011655 N 0.712
Bo1g006000 Brassica oleracea Bo1g006000 N 0.712
BGIOSGA027713 Oryza indica BGIOSGA027713 N 0.712
ORGLA08G0012100 Oryza glaberrima ORGLA08G0012100 N 0.712
ORUFI08G02050 Oryza rufipogon ORUFI08G02050 N 0.712
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.712
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.727
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.833
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.864
Cla016088 Citrullus lanatus Cla016088 N 0.727
Ca_11038 Cicer arietinum Ca_11038 N 0.712
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.742
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.712
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.727
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.924
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.727
OS08G0129200 Oryza sativa OS08G0129200 N 0.712
AMTR_s00041p00167350 Amborella trichopoda AMTR_s00041p00167350 N 0.742