Aan_R002277 (Calypte anna)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Aan_R002277 T165273_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LIN28B
M04663_2.00
Homo sapiens
CGCGRWRDRRCDGCG

CGCHGYYHYWYCGCG
SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX
0.894 0.894
LIN28B
M04664_2.00
Homo sapiens
CGCGRTRNNRCDGCG

CGCHGYNNYAYCGCG
SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX
0.894 0.894
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R002277 CSD 29 101

Links

Other CSD family TFs
Other Calypte anna TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI2G08810 Brachypodium distachyon BRADI2G08810 N 0.000
F775_00318 Aegilops tauschii F775_00318 N 0.000
GSMUA_Achr10G02050_001 Musa acuminata GSMUA_Achr10G02050_001 N 0.000
GSMUA_Achr8G22220_001 Musa acuminata GSMUA_Achr8G22220_001 N 0.000
MLOC_76252 Hordeum vulgare MLOC_76252 N 0.000
OMERI01G09440 Oryza meridionalis OMERI01G09440 N 0.000
ONIVA11G16880 Oryza nivara ONIVA11G16880 N 0.000
OPUNC01G09340 Oryza punctata OPUNC01G09340 N 0.000
ORGLA01G0085600 Oryza glaberrima ORGLA01G0085600 N 0.000
ORUFI01G10280 Oryza rufipogon ORUFI01G10280 N 0.000
Pavir.Ea00827 Panicum virgatum Pavir.Ea00827 N 0.000
Pavir.Eb00923 Panicum virgatum Pavir.Eb00923 N 0.000
Sb03g005180 Sorghum bicolor Sb03g005180 N 0.000
Sb03g009480 Sorghum bicolor Sb03g009480 N 0.000
Si005179m.g Setaria italica Si005179m.g N 0.000