Aan_R002277 (Calypte anna)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Aan_R002277 T165273_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LIN28B
M04663_2.00
Homo sapiens
CGCGRWRDRRCDGCG

CGCHGYYHYWYCGCG
SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX
0.894 0.894
LIN28B
M04664_2.00
Homo sapiens
CGCGRTRNNRCDGCG

CGCHGYNNYAYCGCG
SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX
0.894 0.894
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R002277 CSD 29 101

Links

Other CSD family TFs
Other Calypte anna TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PredSwiss_ASS2010_2976.1 Pneumocystis carinii PredSwiss_ASS2010_2976.1 N 0.000
PredSwiss_CON532.6 Pneumocystis carinii PredSwiss_CON532.6 N 0.000
PredSwiss_EST317.1 Pneumocystis carinii PredSwiss_EST317.1 N 0.000
PNEG_01730 Pneumocystis murina PNEG_01730 N 0.000
PaG_06097 Pseudozyma aphidis PaG_06097 N 0.000
PHSY_002793 Pseudozyma hubeiensis PHSY_002793 N 0.000
sr14215 Sporisorium reilianum sr14215 N 0.000
UHOR_04948 Ustilago hordei UHOR_04948 N 0.000
UM03172 Ustilago maydis UM03172 N 0.000