CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000389639-D2
(
Bos grunniens
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
ENSP00000389639-D2
T165313_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR
YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.980
0.980
YBX1
M10411_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.980
0.980
YBX1
M10412_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.980
0.980
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD
HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.980
0.980
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN
NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.776
0.776
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000389639-D2
CSD
91
143
WRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP
Links
Other
CSD
family TFs
Other
Bos grunniens
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gfo_R009480
Geospiza fortis
Gfo_R009480
I
1.000
Brh_R010004
Buceros rhinoceros
Brh_R010004
I
1.000
ENSMEUG00000009893
Macropus eugenii
ENSMEUG00000009893
I
1.000
Tal_R011198
Tyto alba
Tal_R011198
I
1.000
Cmyd_10003103
Chelonia mydas
Cmyd_10003103
I
1.000
YBX3
Tursiops truncatus
ENSTTRG00000008045
I
1.000
ENSOCUG00000028047
Oryctolagus cuniculus
ENSOCUG00000028047
I
1.000
Afo_R006672
Aptenodytes forsteri
Afo_R006672
I
1.000
Cmyd_10002115
Chelonia mydas
Cmyd_10002115
I
1.000
ENSFCAG00000022604
Felis catus
ENSFCAG00000022604
I
1.000
YBX3
Myotis lucifugus
ENSMLUG00000007476
I
0.980
ENSMMUG00000013136
Macaca mulatta
ENSMMUG00000013136
I
0.980
Aan_R001440
Calypte anna
Aan_R001440
I
0.980
ENSMICG00000014984
Microcebus murinus
ENSMICG00000014984
I
0.980
YBX3
Macaca mulatta
ENSMMUG00000022469
I
0.980
YBX1
Monodelphis domestica
ENSMODG00000017214
I
0.980
YBX1
Vicugna pacos
ENSVPAG00000000068
I
0.980
ENSMPUG00000013922
Mustela putorius furo
ENSMPUG00000013922
I
0.980
ENSXMAG00000018674
Xiphophorus maculatus
ENSXMAG00000018674
I
0.980
Aan_R014295
Calypte anna
Aan_R014295
I
0.980
YBX3
Homo sapiens
ENSG00000060138
I
0.980
YBX3
Gorilla gorilla
ENSGGOG00000001352
I
0.980
Ybx1
Rattus norvegicus
ENSRNOG00000023786
I
0.980
ENSLOCG00000002530
Lepisosteus oculatus
ENSLOCG00000002530
I
0.980
YBX3
Loxodonta africana
ENSLAFG00000017247
I
0.980
ENSGALG00000018512
Gallus gallus
ENSGALG00000018512
I
0.980
YBX1
Gallus gallus
ENSGALG00000004848
I
0.980
YBX3
Meleagris gallopavo
ENSMGAG00000014224
I
0.980
YBX1
Homo sapiens
ENSG00000065978
D
0.980
ybx1
Gasterosteus aculeatus
ENSGACG00000006447
I
0.980
YBX1
Meleagris gallopavo
ENSMGAG00000006879
I
0.980
ENSLAFG00000007597
Loxodonta africana
ENSLAFG00000007597
I
0.980
Ybx3
Mus musculus
ENSMUSG00000030189
I
0.980
YBX3
Sus scrofa
ENSSSCG00000000633
I
0.980
ENSSHAG00000014452
Sarcophilus harrisii
ENSSHAG00000014452
I
0.980
ENSPANG00000016576
Papio anubis
ENSPANG00000016576
I
0.980
ENSPANG00000013156
Papio anubis
ENSPANG00000013156
I
0.980
ENSSTOG00000002108
Ictidomys tridecemlineatus
ENSSTOG00000002108
I
0.980
ENSPANG00000010280
Papio anubis
ENSPANG00000010280
I
0.980
ENSPFOG00000011441
Poecilia formosa
ENSPFOG00000011441
I
0.980
ENSPPYG00000004279
Pongo abelii
ENSPPYG00000004279
I
0.980
YBX3
Pteropus vampyrus
ENSPVAG00000006740
I
0.980
Ybx3
Rattus norvegicus
ENSRNOG00000005480
I
0.980
YBX1
Pteropus vampyrus
ENSPVAG00000005504
I
0.980
ENSPSIG00000011017
Pelodiscus sinensis
ENSPSIG00000011017
I
0.980
ENSPSIG00000009247
Pelodiscus sinensis
ENSPSIG00000009247
I
0.980
ybx1
Oryzias latipes
ENSORLG00000004225
I
0.980
ENSONIG00000002062
Oreochromis niloticus
ENSONIG00000002062
I
0.980
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.980
ybx1
Takifugu rubripes
ENSTRUG00000015333
I
0.980
ENSOANG00000001663
Ornithorhynchus anatinus
ENSOANG00000001663
I
0.980
ENSNLEG00000012324
Nomascus leucogenys
ENSNLEG00000012324
I
0.980
YBX3
Felis catus
ENSFCAG00000027748
I
0.980
ybx1
Tetraodon nigroviridis
ENSTNIG00000011989
I
0.980
ENSOARG00000020447
Ovis aries
ENSOARG00000020447
I
0.980
YBX1
Otolemur garnettii
ENSOGAG00000006784
I
0.980
YBX3
Tupaia belangeri
ENSTBEG00000012570
I
0.980
YBX3
Taeniopygia guttata
ENSTGUG00000012047
I
0.980
YBX1
Taeniopygia guttata
ENSTGUG00000017262
I
0.980
ENSOARG00000020919
Ovis aries
ENSOARG00000020919
I
0.980
Ybx1
Mus musculus
ENSMUSG00000028639
I
0.980
ENSLACG00000018135
Latimeria chalumnae
ENSLACG00000018135
I
0.980
YBX3
Choloepus hoffmanni
ENSCHOG00000011988
I
0.980
YBX3
Canis familiaris
ENSCAFG00000013401
I
0.980
Pvit_10025
Pogona vitticeps
Pvit_10025
I
0.980
YBX1
Canis familiaris
ENSCAFG00000002541
I
0.980
Afo_R014263
Aptenodytes forsteri
Afo_R014263
I
0.980
ENSCJAG00000021660
Callithrix jacchus
ENSCJAG00000021660
I
0.980
YBX1
Cavia porcellus
ENSCPOG00000010888
I
0.980
ENSBTAP00000012735-D1
Bos grunniens
ENSBTAP00000012735-D1
I
0.980
ENSP00000228251
Macaca fascicularis
ENSP00000228251
I
0.980
Gfo_R007354
Geospiza fortis
Gfo_R007354
I
0.980
YBX1
Bos taurus
ENSBTAG00000017368
I
0.980
YBX3
Bos taurus
ENSBTAG00000009663
I
0.980
AAI30161
Xenopus laevis
AAI30161
I
0.980
CAA42778
Xenopus laevis
CAA42778
I
0.980
ybx1
Xenopus tropicalis
XB-GENE-480746
I
0.980
ybx1.S
Xenopus laevis
XB-GENE-865405
I
0.980
AAH42217
Xenopus laevis
AAH42217
I
0.980
ENSAMEG00000000494
Ailuropoda melanoleuca
ENSAMEG00000000494
I
0.980
ENSAPLG00000004899
Anas platyrhynchos
ENSAPLG00000004899
I
0.980
ENSAPLG00000003147
Anas platyrhynchos
ENSAPLG00000003147
I
0.980
ENSAMXG00000014478
Astyanax mexicanus
ENSAMXG00000014478
I
0.980
ENSAMEG00000009393
Ailuropoda melanoleuca
ENSAMEG00000009393
I
0.980
YBX3
Cavia porcellus
ENSCPOG00000011329
I
0.980
ENSCJAG00000003155
Callithrix jacchus
ENSCJAG00000003155
I
0.980
ENSECAG00000023592
Equus caballus
ENSECAG00000023592
I
0.980
ybx1
Danio rerio
ENSDARG00000004757
I
0.980
Ybx3
Dipodomys ordii
ENSDORG00000009103
I
0.980
YBX3
Equus caballus
ENSECAG00000013777
I
0.980
Brh_R007443
Buceros rhinoceros
Brh_R007443
I
0.980
ENSECAG00000008961
Equus caballus
ENSECAG00000008961
I
0.980
ENSCSAG00000008744
Chlorocebus sabaeus
ENSCSAG00000008744
I
0.980
ENSFALG00000003661
Ficedula albicollis
ENSFALG00000003661
I
0.980
YBX1
Erinaceus europaeus
ENSEEUG00000005657
I
0.980
YBX3
Erinaceus europaeus
ENSEEUG00000010415
I
0.980
YBX3
Echinops telfairi
ENSETEG00000002557
I
0.980
YBX2
Microcebus murinus
ENSMICG00000012453
I
0.979
YBX2
Vicugna pacos
ENSVPAG00000003104
I
0.979
ENSSTOG00000000116
Ictidomys tridecemlineatus
ENSSTOG00000000116
I
0.979
ENSMLUG00000029452
Myotis lucifugus
ENSMLUG00000029452
I
0.975
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
I
0.975
Tal_R003478
Tyto alba
Tal_R003478
I
0.973
YBX3
Pan troglodytes
ENSPTRG00000004681
I
0.960
Ogr02658
Ophisaurus gracilis
Ogr02658
I
0.959
ENSCJAG00000010572
Callithrix jacchus
ENSCJAG00000010572
I
0.959
ENSMPUG00000010386
Mustela putorius furo
ENSMPUG00000010386
I
0.959
ENSGGOG00000004758
Gorilla gorilla
ENSGGOG00000004758
I
0.959
ENSCSAG00000001168
Chlorocebus sabaeus
ENSCSAG00000001168
I
0.959
Myotis_brandtii_YBX1_10016780
Myotis brandtii
Myotis_brandtii_YBX1_10016780
I
0.958
ENSSHAG00000011350
Sarcophilus harrisii
ENSSHAG00000011350
I
0.952
YBX1
Loxodonta africana
ENSLAFG00000031170
I
0.949
Alligator_sinensis_CCG014301.1
Alligator sinensis
Alligator_sinensis_CCG014301.1
I
0.949
Myotis_brandtii_YBX2_10021025
Myotis brandtii
Myotis_brandtii_YBX2_10021025
I
0.939
Sakowv30002198m.g
Saccoglossus kowalevskii
Sakowv30002198m.g
I
0.939
YBX2
Sorex araneus
ENSSARG00000000488
I
0.939
ENSGMOG00000015216
Gadus morhua
ENSGMOG00000015216
I
0.939
ENSOCUG00000021258
Oryctolagus cuniculus
ENSOCUG00000021258
I
0.927
ENSOCUG00000026608
Oryctolagus cuniculus
ENSOCUG00000026608
I
0.925
YBX2
Loxodonta africana
ENSLAFG00000014006
I
0.922
ENSCJAG00000033824
Callithrix jacchus
ENSCJAG00000033824
I
0.918
e_gw.440.24.1
Branchiostoma floridae
e_gw.440.24.1
I
0.918
YBX2
Gorilla gorilla
ENSGGOG00000007399
I
0.918
ENSMODG00000022963
Monodelphis domestica
ENSMODG00000022963
I
0.918
ENSCJAG00000031567
Callithrix jacchus
ENSCJAG00000031567
I
0.918
Pvit_07856
Pogona vitticeps
Pvit_07856
I
0.904
ENSMLUG00000024638
Myotis lucifugus
ENSMLUG00000024638
I
0.902
ENSCJAG00000035469
Callithrix jacchus
ENSCJAG00000035469
I
0.898
ENSCJAG00000007407
Callithrix jacchus
ENSCJAG00000007407
I
0.898
ENSFALG00000010305
Ficedula albicollis
ENSFALG00000010305
I
0.889
ENSGGOG00000023840
Gorilla gorilla
ENSGGOG00000023840
I
0.886
ENSOCUG00000000147
Oryctolagus cuniculus
ENSOCUG00000000147
I
0.882
ACYPI003867
Acyrthosiphon pisum
ACYPI003867
I
0.878
CapteG166603
Capitella teleta
CapteG166603
I
0.878
SINV21160
Solenopsis invicta
SINV21160
I
0.872
ENSOCUG00000022716
Oryctolagus cuniculus
ENSOCUG00000022716
I
0.867
ENSONIG00000018954
Oreochromis niloticus
ENSONIG00000018954
I
0.857
ENSOGAG00000014939
Otolemur garnettii
ENSOGAG00000014939
I
0.857
CLEC013418
Cimex lectularius
CLEC013418
I
0.851
ENSMPUG00000011810
Mustela putorius furo
ENSMPUG00000011810
I
0.843
ENSOGAG00000030653
Otolemur garnettii
ENSOGAG00000030653
I
0.837
LDEC002142
Leptinotarsa decemlineata
LDEC002142
I
0.837
ENSGGOG00000023581
Gorilla gorilla
ENSGGOG00000023581
I
0.837
YBX2
Oryctolagus cuniculus
ENSOCUG00000015064
I
0.825
RPRC001993
Rhodnius prolixus
RPRC001993
I
0.816
ENSSTOG00000026413
Ictidomys tridecemlineatus
ENSSTOG00000026413
I
0.816
ENSSTOG00000022212
Ictidomys tridecemlineatus
ENSSTOG00000022212
I
0.816
ENSSTOG00000027979
Ictidomys tridecemlineatus
ENSSTOG00000027979
I
0.816
ENSOGAG00000030360
Otolemur garnettii
ENSOGAG00000030360
I
0.816
ENSMPUG00000018977
Mustela putorius furo
ENSMPUG00000018977
I
0.816
ENSCAFG00000016520
Canis familiaris
ENSCAFG00000016520
I
0.816
ENSDNOG00000040947
Dasypus novemcinctus
ENSDNOG00000040947
I
0.816
ENSCAFG00000016523
Canis familiaris
ENSCAFG00000016523
I
0.816
YBX1
Tursiops truncatus
ENSTTRG00000001353
I
0.814
ENSSHAG00000007786
Sarcophilus harrisii
ENSSHAG00000007786
I
0.797
ACHR003797
Anopheles christyi
ACHR003797
I
0.796
AARA007412
Anopheles arabiensis
AARA007412
I
0.796
CapteG48958
Capitella teleta
CapteG48958
I
0.796
SPU_003107
Strongylocentrotus purpuratus
SPU_003107
I
0.796
AGAP006108
Anopheles gambiae
AGAP006108
I
0.796
ACOM024661
Anopheles coluzzii
ACOM024661
I
0.796
AMEM010049
Anopheles merus
AMEM010049
I
0.796
AMIN009954
Anopheles minimus
AMIN009954
I
0.796
AQUA011660
Anopheles quadriannulatus
AQUA011660
I
0.796
ACUA007180
Anopheles culicifacies
ACUA007180
I
0.796
ENSSARG00000012628
Sorex araneus
ENSSARG00000012628
I
0.796
AEPI000589
Anopheles epiroticus
AEPI000589
I
0.796
AFUN005441
Anopheles funestus
AFUN005441
I
0.796
AMEC011905
Anopheles melas
AMEC011905
I
0.796
ASTEI02878
Anopheles stephensi
ASTEI02878
I
0.796
CpipJ_CPIJ002248
Culex pipiens
CpipJ_CPIJ002248
I
0.784
CPIJ002248
Culex quinquefasciatus
CPIJ002248
I
0.784
ENSCJAG00000031891
Callithrix jacchus
ENSCJAG00000031891
I
0.780
Bm3781
Brugia malayi
Bm3781
I
0.776
nLs.2.1.2.g03745
Litomosoides sigmodontis
nLs.2.1.2.g03745
I
0.776
ENSMICG00000004602
Microcebus murinus
ENSMICG00000004602
I
0.776
nAv.1.0.1.g07732
Acanthocheilonema viteae
nAv.1.0.1.g07732
I
0.776
CapteG58124
Capitella teleta
CapteG58124
I
0.776
WUBG_03960
Wuchereria bancrofti
WUBG_03960
I
0.776
EEL_0000726801
Elaeophora elaphi
EEL_0000726801
I
0.776
GPUH_0001124501
Gongylonema pulchrum
GPUH_0001124501
I
0.776
nOo.2.0.1.g01690
Onchocerca ochengi
nOo.2.0.1.g01690
I
0.776
nDi.2.2.2.g07679
Dirofilaria immitis
nDi.2.2.2.g07679
I
0.776
WBGene00247949
Onchocerca volvulus
WBGene00247949
I
0.776
YBX3
Vicugna pacos
ENSVPAG00000000876
I
0.776
T265_06248
Opisthorchis viverrini
T265_06248
I
0.776
LOAG_17966
Loa loa
LOAG_17966
I
0.776
YBX3
Oryctolagus cuniculus
ENSOCUG00000001889
I
0.770
CapteG121832
Capitella teleta
CapteG121832
I
0.765
ENSSSCG00000028485
Sus scrofa
ENSSSCG00000028485
I
0.758
ENSORLG00000018683
Oryzias latipes
ENSORLG00000018683
I
0.755
TRE_0001884901
Trichobilharzia regenti
TRE_0001884901
I
0.735
ENSAMEG00000008685
Ailuropoda melanoleuca
ENSAMEG00000008685
I
0.735
ENSOGAG00000031268
Otolemur garnettii
ENSOGAG00000031268
I
0.735
ybx2.L
Xenopus laevis
XB-GENE-6252609
I
0.727
ENSCAFG00000005162
Canis familiaris
ENSCAFG00000005162
I
0.724
ENSMMUG00000032563
Macaca mulatta
ENSMMUG00000032563
I
0.723
YBX3
Procavia capensis
ENSPCAG00000001397
I
0.723
ENSBTAG00000045616
Bos taurus
ENSBTAG00000045616
I
0.714
Minc12652
Meloidogyne incognita
Minc12652
I
0.714
DICVIV_10680
Dictyocaulus viviparus
DICVIV_10680
I
0.714
MhA1_Contig2458.frz3.gene1
Meloidogyne hapla
MhA1_Contig2458.frz3.gene1
I
0.714
HPBE_0000695301
Heligmosomoides bakeri
HPBE_0000695301
I
0.714
NBR_0000795701
Nippostrongylus brasiliensis
NBR_0000795701
I
0.714
cey-1
Caenorhabditis elegans
WBGene00000472
D
0.714
TELCIR_06115
Teladorsagia circumcincta
TELCIR_06115
I
0.714
ENSOARG00000004633
Ovis aries
ENSOARG00000004633
I
0.714
Cmyd_10000339
Chelonia mydas
Cmyd_10000339
I
0.714
genemark-nMf.1.1.scaf00296-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf00296-processed-gene-0.4
I
0.714
ACAC_0000909201
Angiostrongylus cantonensis
ACAC_0000909201
I
0.714
ACOC_0000576201
Angiostrongylus costaricensis
ACOC_0000576201
I
0.714
YBX2
Sus scrofa
ENSSSCG00000017938
I
0.712
ENSPSIG00000012364
Pelodiscus sinensis
ENSPSIG00000012364
I
0.712
ENSSHAG00000003262
Sarcophilus harrisii
ENSSHAG00000003262
I
0.712
ENSSTOG00000008630
Ictidomys tridecemlineatus
ENSSTOG00000008630
I
0.712
ENSSSCG00000030357
Sus scrofa
ENSSSCG00000030357
I
0.712
YBX2
Procavia capensis
ENSPCAG00000008019
I
0.712
ENSPANG00000024250
Papio anubis
ENSPANG00000024250
I
0.712
YBX2
Tupaia belangeri
ENSTBEG00000001266
I
0.712
ENSOARG00000011562
Ovis aries
ENSOARG00000011562
I
0.712
YBX2
Equus caballus
ENSECAG00000009996
I
0.712
YBX2
Dasypus novemcinctus
ENSDNOG00000013746
I
0.712
ENSCSAG00000011857
Chlorocebus sabaeus
ENSCSAG00000011857
I
0.712
ENSMMUP00000017257
Macaca fascicularis
ENSMMUP00000017257
I
0.712
YBX2
Cavia porcellus
ENSCPOG00000009543
I
0.712
ENSECAG00000011356
Equus caballus
ENSECAG00000011356
I
0.712
Alligator_sinensis_CCG005029.1
Alligator sinensis
Alligator_sinensis_CCG005029.1
I
0.712
YBX3
Monodelphis domestica
ENSMODG00000018248
I
0.712
ENSNLEG00000008063
Nomascus leucogenys
ENSNLEG00000008063
I
0.712
ENSMMUG00000022712
Macaca mulatta
ENSMMUG00000022712
I
0.712
ENSLOCG00000013819
Lepisosteus oculatus
ENSLOCG00000013819
I
0.712
YBX2
Felis catus
ENSFCAG00000018097
I
0.712
ybx2.S
Xenopus laevis
XB-GENE-6254213
I
0.712
ENSP00000007699-D1
Bos grunniens
ENSP00000007699-D1
I
0.712
ENSAMEG00000016564
Ailuropoda melanoleuca
ENSAMEG00000016564
I
0.712
YBX2
Bos taurus
ENSBTAG00000009126
I
0.712
Ybx2
Mus musculus
ENSMUSG00000018554
I
0.712
YBX2
Ochotona princeps
ENSOPRG00000013773
I
0.712
ybx2
Xenopus tropicalis
XB-GENE-5798907
I
0.712
ENSCJAG00000032211
Callithrix jacchus
ENSCJAG00000032211
I
0.712
ENSCAFG00000016128
Canis familiaris
ENSCAFG00000016128
I
0.712
ENSCAFG00000017286
Canis familiaris
ENSCAFG00000017286
I
0.712
Ogr10632
Ophisaurus gracilis
Ogr10632
I
0.712
Ybx2
Rattus norvegicus
ENSRNOG00000017117
I
0.712
YBX2
Otolemur garnettii
ENSOGAG00000004392
I
0.712
YBX2
Callithrix jacchus
ENSCJAG00000016581
I
0.712
YBX2
Myotis lucifugus
ENSMLUG00000004686
I
0.708
ENSPANG00000005177
Papio anubis
ENSPANG00000005177
I
0.708