CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm020837
(
Prunus mume
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Pm020837
T165332_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CSP4
M01902_2.00
Arabidopsis thaliana
AAWAAAAM
KTTTTWTT
PBM
Weirauch et al.(2014)
pTH7494
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm020837
CSD
5
71
LSGTVKWFNDQKGFGFITPNDGGDDLFVHQSSIRTEGFRTLGDGESVEFQIESDSDGRTKAVDVTGP
Links
Other
CSD
family TFs
Other
Prunus mume
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy