Ocbimv22004323m.g (Octopus bimaculoides)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Ocbimv22004323m.g T165411_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-28
M03713_2.00 		Drosophila melanogaster
KCGTGTAGGTCGGTGGB
VCCACCGACCTACACGM		 SELEX
Nitta et al.(2015)
lin-28_1 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22004323m.p CSD 54 83

Links

Other CSD family TFs
Other Octopus bimaculoides TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LotgiG108358 Lottia gigantea LotgiG108358 N 0.833
KGM_16662 Danaus plexippus KGM_16662 I 0.800
BGIBMGA000377 Bombyx mori BGIBMGA000377 I 0.800
SMU15026064 Schmidtea mediterranea SMU15026064 N 0.767
ACHR009791 Anopheles christyi ACHR009791 I 0.733