Carubv10015336m.g (Capsella rubella)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Carubv10015336m.g T165430_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10015336m CSD 11 77

Links

Other CSD family TFs
Other Capsella rubella TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3126s0019 Capsella grandiflora Cagra.3126s0019 N 1.000
Bostr.18351s0255 Boechera stricta Bostr.18351s0255 N 0.970
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.970
CSP3 Arabidopsis thaliana AT2G17870 N 0.894
ATCSP3 Arabidopsis lyrata fgenesh2_kg.3__3388__AT2G17870.1 N 0.879
Bo7g012920 Brassica oleracea Bo7g012920 N 0.848
Bra002099 Brassica rapa Bra002099 N 0.848
Bostr.7867s1467 Boechera stricta Bostr.7867s1467 N 0.833
Thhalv10026001m.g Eutrema salsugineum Thhalv10026001m.g N 0.803
CSP1 Arabidopsis thaliana AT4G36020 N 0.803
evm.TU.supercontig_6.261 Carica papaya evm.TU.supercontig_6.261 N 0.788
Carubv10006250m.g Capsella rubella Carubv10006250m.g N 0.773
Cagra.2236s0009 Capsella grandiflora Cagra.2236s0009 N 0.773
CSDP1 Arabidopsis lyrata fgenesh2_kg.7__465__AT4G36020.1 N 0.773
Bo7g117730 Brassica oleracea Bo7g117730 N 0.758
Bra017742 Brassica rapa Bra017742 N 0.758
MDP0000632148 Malus domestica MDP0000632148 N 0.742
MDP0000198079 Malus domestica MDP0000198079 N 0.742
MDP0000121628 Malus domestica MDP0000121628 N 0.727
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.712
Cla016088 Citrullus lanatus Cla016088 N 0.712
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.712
Bra011655 Brassica rapa Bra011655 N 0.712
Bo1g006000 Brassica oleracea Bo1g006000 N 0.712
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.712
PRUPE_ppa010531mg Prunus persica PRUPE_ppa010531mg N 0.712
Pm026767 Prunus mume Pm026767 N 0.712
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.712
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.712