CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.002G195100
(
Gossypium raimondii
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Gorai.002G195100
T165453_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CSP4
M01902_2.00
Arabidopsis thaliana
AAWAAAAM
KTTTTWTT
PBM
Weirauch et al.(2014)
pTH7494
0.742
0.742
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G195100.1
CSD
6
71
MTGKVKWFDDQKGYGFISPDDGGDDLFVHQSSIRSEGFRSLADGEEVEYVVESSEGRPKAVEVTGP
Gorai.002G195100.2
CSD
6
71
MTGKVKWFDDQKGYGFISPDDGGDDLFVHQSSIRSEGFRSLADGEEVEYVVESSEGRPKAVEVTGP
Links
Other
CSD
family TFs
Other
Gossypium raimondii
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy