Pavir.Gb00310 (Panicum virgatum)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Pavir.Gb00310 T165480_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb00310.1.p CSD 6 72

Links

Other CSD family TFs
Other Panicum virgatum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R002178 Calypte anna Aan_R002178 I 0.000
Aan_R005718 Calypte anna Aan_R005718 I 0.000
ACEP15304 Atta cephalotes ACEP15304 I 0.000
ACEP15310 Atta cephalotes ACEP15310 I 0.000
ACUA026425 Anopheles culicifacies ACUA026425 I 0.000
AFAF004706 Anopheles farauti AFAF004706 I 0.000
Afo_R004464 Aptenodytes forsteri Afo_R004464 I 0.000
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.000
AFUN002668 Anopheles funestus AFUN002668 I 0.000
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I 0.000
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I 0.000
Alligator_sinensis_CCG007145.1 Alligator sinensis Alligator_sinensis_CCG007145.1 I 0.000
Alligator_sinensis_CCG007145.2 Alligator sinensis Alligator_sinensis_CCG007145.2 I 0.000
AMIN006553 Anopheles minimus AMIN006553 I 0.000
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.000
Cflo_06473--XP_394848.3_APIME Camponotus floridanus Cflo_06473--XP_394848.3_APIME I 0.000
CGI_10005222 Crassostrea gigas CGI_10005222 I 0.000
Cmyd_10010530 Chelonia mydas Cmyd_10010530 I 0.000
CPIJ006494 Culex quinquefasciatus CPIJ006494 I 0.000
CpipJ_CPIJ006494 Culex pipiens CpipJ_CPIJ006494 I 0.000
DAPPUDRAFT_7942 Daphnia pulex DAPPUDRAFT_7942 I 0.000
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I 0.000
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I 0.000
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.000
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I 0.000
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.000
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I 0.000
ENSAMXG00000008583 Astyanax mexicanus ENSAMXG00000008583 I 0.000
ENSAMXG00000009227 Astyanax mexicanus ENSAMXG00000009227 I 0.000
ENSAMXG00000012274 Astyanax mexicanus ENSAMXG00000012274 I 0.000
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I 0.000
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I 0.000
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.000
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I 0.000
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I 0.000
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I 0.000
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.000
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I 0.000
ENSGMOG00000003366 Gadus morhua ENSGMOG00000003366 I 0.000
ENSGMOG00000018913 Gadus morhua ENSGMOG00000018913 I 0.000
ENSLACG00000009610 Latimeria chalumnae ENSLACG00000009610 I 0.000
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.000
ENSLACG00000015921 Latimeria chalumnae ENSLACG00000015921 I 0.000
ENSLOCG00000015261 Lepisosteus oculatus ENSLOCG00000015261 I 0.000
ENSLOCG00000016871 Lepisosteus oculatus ENSLOCG00000016871 I 0.000
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I 0.000
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I 0.000
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I 0.000
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I 0.000
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.000
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I 0.000
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I 0.000
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.000
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I 0.000
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I 0.000
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I 0.000
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.000
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.000
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I 0.000
ENSONIG00000000205 Oreochromis niloticus ENSONIG00000000205 I 0.000
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.000
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.000
ENSORLG00000019389 Oryzias latipes ENSORLG00000019389 I 0.000
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.000
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.000
ENSP00000355245 Macaca fascicularis ENSP00000355245 I 0.000
ENSP00000381499 Macaca fascicularis ENSP00000381499 I 0.000
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I 0.000
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I 0.000
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I 0.000
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.000
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I 0.000
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.000
ENSPFOG00000019830 Poecilia formosa ENSPFOG00000019830 I 0.000
ENSPMAG00000010308 Petromyzon marinus ENSPMAG00000010308 I 0.000
ENSPMAG00000010414 Petromyzon marinus ENSPMAG00000010414 I 0.000
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I 0.000
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I 0.000
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.000
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I 0.000
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I 0.000
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I 0.000
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I 0.000
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.000
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I 0.000
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I 0.000
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.000
ENSTGUG00000007526 Taeniopygia guttata ENSTGUG00000007526 I 0.000
ENSTNIG00000005391 Tetraodon nigroviridis ENSTNIG00000005391 I 0.000
ENSTNIG00000005618 Tetraodon nigroviridis ENSTNIG00000005618 I 0.000
ENSTRUG00000007849 Takifugu rubripes ENSTRUG00000007849 I 0.000
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.000
ENSXMAG00000003038 Xiphophorus maculatus ENSXMAG00000003038 I 0.000
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I 0.000
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.000
GL14130 Drosophila persimilis FBgn0151735 I 0.000
HelroG124549 Helobdella robusta HelroG124549 I 0.000
ISCW003096 Ixodes scapularis ISCW003096 I 0.000
LotgiG161614 Lottia gigantea LotgiG161614 I 0.000
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.000
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.000
Ogr18043 Ophisaurus gracilis Ogr18043 I 0.000
Ogr18451 Ophisaurus gracilis Ogr18451 I 0.000
Ogr19508 Ophisaurus gracilis Ogr19508 I 0.000
Pax-2 Gallus gallus ENSGALG00000005689 I 0.000
PAX1 Callithrix jacchus ENSCJAG00000005773 I 0.000
PAX1 Ochotona princeps ENSOPRG00000017249 I 0.000
pax1 Oryzias latipes ENSORLG00000017412 I 0.000
PAX1 Tursiops truncatus ENSTTRG00000002444 I 0.000
PAX1 Homo sapiens ENSG00000125813 D 0.000
Pax1 Dipodomys ordii ENSDORG00000016051 I 0.000
PAX1 Cavia porcellus ENSCPOG00000002886 I 0.000
PAX1 Pan troglodytes ENSPTRG00000013311 I 0.000
PAX1 Procavia capensis ENSPCAG00000003556 I 0.000
PAX1 Canis familiaris ENSCAFG00000005170 I 0.000
PAX1 Felis catus ENSFCAG00000004293 I 0.000
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I 0.000
PAX1 Macaca mulatta ENSMMUG00000019409 I 0.000
PAX1 Sus scrofa ENSSSCG00000007112 I 0.000
Pax1 Mus musculus ENSMUSG00000037034 I 0.000
pax1 Xenopus tropicalis XB-GENE-487951 I 0.000
PAX1 Myotis lucifugus ENSMLUG00000014710 I 0.000
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I 0.000
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I 0.000
PAX1 Erinaceus europaeus ENSEEUG00000007846 I 0.000
PAX1 Pteropus vampyrus ENSPVAG00000002604 I 0.000
PAX1 Otolemur garnettii ENSOGAG00000033162 I 0.000
PAX1 Gorilla gorilla ENSGGOG00000016075 I 0.000
PAX1 Bos taurus ENSBTAG00000006742 I 0.000
PAX1 Monodelphis domestica ENSMODG00000006198 I 0.000
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.000
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.000
pax1a Danio rerio ENSDARG00000008203 I 0.000
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.000
pax1b Danio rerio ENSDARG00000073814 I 0.000
PAX2 Homo sapiens ENSG00000075891 D 0.000
pax2 Xenopus tropicalis XB-GENE-486801 D 0.000
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.000
pax2.L Xenopus laevis XB-GENE-486805 I 0.000
pax2a Danio rerio ENSDARG00000028148 I 0.000
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.000
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.000
PAX3 Macaca mulatta ENSMMUG00000020409 I 0.000
PAX3 Callithrix jacchus ENSCJAG00000012088 I 0.000
PAX3 Homo sapiens ENSG00000135903 D 0.000
PAX5 Bos taurus ENSBTAG00000012498 I 0.000
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.000
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.000
PAX5 Canis familiaris ENSCAFG00000002357 I 0.000
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.000
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.000
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.000
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.000
PAX5 Felis catus ENSFCAG00000001628 I 0.000
PAX5 Homo sapiens ENSG00000196092 D 0.000
PAX5 Procavia capensis ENSPCAG00000004660 I 0.000
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.000
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.000
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.000
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.000
PAX5 Microcebus murinus ENSMICG00000017679 I 0.000
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.000
Pax5 Mus musculus ENSMUSG00000014030 D 0.000
PAX5 Echinops telfairi ENSETEG00000002360 I 0.000
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.000
PAX5 Equus caballus ENSECAG00000000551 I 0.000
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.000
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.000
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.000
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.000
Pax5B Gallus gallus ENSGALG00000016431 D 0.000
PAX7 Procavia capensis ENSPCAG00000005303 I 0.000
Pax7 Dipodomys ordii ENSDORG00000011854 I 0.000
PAX7 Homo sapiens ENSG00000009709 D 0.000
pax8 Danio rerio ENSDARG00000015879 I 0.000
PAX9 Loxodonta africana ENSLAFG00000017541 I 0.000
PAX9 Myotis lucifugus ENSMLUG00000011407 I 0.000
PAX9 Microcebus murinus ENSMICG00000010808 I 0.000
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I 0.000
PAX9 Monodelphis domestica ENSMODG00000012681 I 0.000
pax9 Xenopus tropicalis XB-GENE-482238 I 0.000
PAX9 Taeniopygia guttata ENSTGUG00000012015 I 0.000
PAX9 Macaca mulatta ENSMMUG00000009648 I 0.000
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I 0.000
Pax9 Mus musculus ENSMUSG00000001497 I 0.000
PAX9 Bos taurus ENSBTAG00000009186 I 0.000
PAX9 Gorilla gorilla ENSGGOG00000001528 I 0.000
Pax9 Rattus norvegicus ENSRNOG00000008826 I 0.000
PAX9 Pan troglodytes ENSPTRG00000006281 I 0.000
PAX9 Echinops telfairi ENSETEG00000002086 I 0.000
PAX9 Equus caballus ENSECAG00000023712 I 0.000
PAX9 Felis catus ENSFCAG00000001024 I 0.000
PAX9 Cavia porcellus ENSCPOG00000010951 I 0.000
PAX9 Tupaia belangeri ENSTBEG00000002460 I 0.000
PAX9 Canis familiaris ENSCAFG00000013690 I 0.000
PAX9 Gallus gallus ENSGALG00000010114 I 0.000
PAX9 Sorex araneus ENSSARG00000000337 I 0.000
PAX9 Callithrix jacchus ENSCJAG00000016460 I 0.000
PAX9 Homo sapiens ENSG00000198807 D 0.000
pax9.L Xenopus laevis XB-GENE-864845 I 0.000
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.000
Pvit_17942 Pogona vitticeps Pvit_17942 I 0.000
RPRC008887 Rhodnius prolixus RPRC008887 I 0.000
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.000
Sakowv30044183m.g Saccoglossus kowalevskii Sakowv30044183m.g I 0.000
SINV15897 Solenopsis invicta SINV15897 I 0.000
SMAR008441 Strigamia maritima SMAR008441 I 0.000
SMAR015380 Strigamia maritima SMAR015380 I 0.000
SPU_006683 Strongylocentrotus purpuratus SPU_006683 I 0.000
XP_002935920 Xenopus tropicalis XP_002935920 I 0.000