|
HHAL001434-PA
(Halyomorpha halys)
CSD
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00313 (CSD) |
IPR002059 |
HHAL001434-PA |
T165508_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
YBX1
M04661_2.00 |
Homo sapiens |
GRTGGWACR |
YGTWCCAYC |
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
|
0.838
|
0.838
|
YBX1
M10411_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$YB1_Q3
|
0.838
|
0.838
|
YBX1
M10412_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$YB1_Q4
|
0.838
|
0.838
|
YBX1
M04662_2.00 |
Homo sapiens |
GRTGKDRCD |
HGYHMCAYC |
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
|
0.838
|
0.838
|
NEMVEDRAFT_v1g104083
M01207_2.00 |
Nematostella vectensis |
NNNDDHRN |
NYDHHNNN |
PBM
Lambert et al.(2019)
pTH9768
|
0.730
|
0.730
|
For this family, TFs with SR scores > 0.700 will likely have a similar motif |