LDEC002142 (Leptinotarsa decemlineata)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 LDEC002142 T165530_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.848 0.848
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.848 0.848
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.848 0.848
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.848 0.848
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN

NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.818 0.818
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD

HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC002142-PA CSD 28 97

Links

Other CSD family TFs
Other Leptinotarsa decemlineata TFs

357 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_045700 Acremonium chrysogenum ACRE_045700 N 0.000
X797_007609 Metarhizium robertsii X797_007609 N 0.000
S40288_08872 Stachybotrys chartarum S40288_08872 N 0.000
S40288_05160 Stachybotrys chartarum S40288_05160 N 0.000
NechaG29793 Fusarium solani NechaG29793 N 0.000
MGU_08690 Metarhizium guizhouense MGU_08690 N 0.000
MBR_06285 Metarhizium brunneum MBR_06285 N 0.000
MAJ_06580 Metarhizium majus MAJ_06580 N 0.000
FVEG_09816 Fusarium verticillioides FVEG_09816 N 0.000
FOXG_10985 Fusarium oxysporum FOXG_10985 N 0.000
FFUJ_01949 Fusarium fujikuroi FFUJ_01949 N 0.000
CGGC5_1524 Colletotrichum gloeosporioides CGGC5_1524 N 0.000
e_gw1.8.413.1 Nectria haematococca e_gw1.8.413.1 N 0.000