PK26692.1 (Cannabis sativa)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 PK26692.1 T165537_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CSP4
M01902_2.00
Arabidopsis thaliana
AAWAAAAM

KTTTTWTT
PBM
Weirauch et al.(2014)
pTH7494
0.745 0.745
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK26692.1 CSD 20 66

Links

Other CSD family TFs
Other Cannabis sativa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.851
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.809
MDP0000225222 Malus domestica MDP0000225222 N 0.809
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.766
mgf001526m Mimulus guttatus mgf001526m N 0.766
mgf014458m Mimulus guttatus mgf014458m N 0.766
Lus10034487.g Linum usitatissimum Lus10034487.g I 0.766
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.745
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.745
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.745
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.745
AMTR_s00041p00167350 Amborella trichopoda AMTR_s00041p00167350 N 0.745
Bo3g141510 Brassica oleracea Bo3g141510 I 0.723
CSP3 Arabidopsis thaliana AT2G17870 N 0.723
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.702
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.702
TRIUR3_31144 Triticum urartu TRIUR3_31144 N 0.702
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.702
Bo7g049880 Brassica oleracea Bo7g049880 I 0.702
GLYMA04G00660 Glycine max GLYMA04G00660 N 0.702
Phatr3_J12737 Phaeodactylum tricornutum Phatr3_J12737 N 0.702
PRUPE_ppa010531mg Prunus persica PRUPE_ppa010531mg N 0.702
Pm026767 Prunus mume Pm026767 N 0.702