CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002939490
(
Xenopus tropicalis
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
XP_002939490
T165594_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002939490
CSD
69
135
YKGVCKCFSRSKGHGFITPVDGGPDIFLHISDIEGEYVPAEGDEVTYKVCTVPPKNEKHQAVEVKIT
Links
Other
CSD
family TFs
Other
Xenopus tropicalis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
XP_002939487
Xenopus tropicalis
XP_002939487
N
1.000
XP_002939489
Xenopus tropicalis
XP_002939489
N
1.000
XP_002939488
Xenopus tropicalis
XP_002939488
N
1.000
Brh_R009850
Buceros rhinoceros
Brh_R009850
N
0.875
ENSCJAG00000022227
Callithrix jacchus
ENSCJAG00000022227
N
0.875
ENSMODG00000024949
Monodelphis domestica
ENSMODG00000024949
N
0.859
CSDC2
Tetraodon nigroviridis
ENSTNIG00000004955
N
0.797
CSDC2
Oryzias latipes
ENSORLG00000014166
N
0.797
ENSLOCG00000011627
Lepisosteus oculatus
ENSLOCG00000011627
N
0.797
CSDC2
Danio rerio
ENSDARG00000100167
N
0.797
ENSAMXG00000008816
Astyanax mexicanus
ENSAMXG00000008816
N
0.781
ENSXMAG00000006935
Xiphophorus maculatus
ENSXMAG00000006935
N
0.781
ENSPFOG00000013668
Poecilia formosa
ENSPFOG00000013668
N
0.781
ENSONIG00000006546
Oreochromis niloticus
ENSONIG00000006546
N
0.781
CSDC2
Gasterosteus aculeatus
ENSGACG00000007540
N
0.766
ENSGMOG00000013294
Gadus morhua
ENSGMOG00000013294
N
0.766
CSDC2
Takifugu rubripes
ENSTRUG00000004175
N
0.766
MDOA012898
Musca domestica
MDOA012898
N
0.703