AMEC021668 (Anopheles melas)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 AMEC021668 T165672_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-28
M03713_2.00 		Drosophila melanogaster
KCGTGTAGGTCGGTGGB
VCCACCGACCTACACGM		 SELEX
Nitta et al.(2015)
lin-28_1 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEC021668-PA CSD 2 67

Links

Other CSD family TFs
Other Anopheles melas TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA008465 Anopheles arabiensis AARA008465 I 1.000
AEPI008253 Anopheles epiroticus AEPI008253 I 1.000
AQUA004698 Anopheles quadriannulatus AQUA004698 I 1.000
ACOM039486 Anopheles coluzzii ACOM039486 I 1.000
AGAP006591 Anopheles gambiae AGAP006591 I 1.000
ADIR007387 Anopheles dirus ADIR007387 I 0.985
AALB005062 Anopheles albimanus AALB005062 I 0.970
ASTEI02701 Anopheles stephensi ASTEI02701 I 0.970
ASIS012373 Anopheles sinensis ASIS012373 I 0.970
ACHR009791 Anopheles christyi ACHR009791 I 0.970
AFAF013794 Anopheles farauti AFAF013794 I 0.955
AATE020348 Anopheles atroparvus AATE020348 I 0.955
ACUA024423 Anopheles culicifacies ACUA024423 I 0.955
AFUN002605 Anopheles funestus AFUN002605 I 0.955
AMIN007802 Anopheles minimus AMIN007802 I 0.939
AMEM002179 Anopheles merus AMEM002179 I 0.939
AAEL004259 Aedes aegypti AAEL004259 N 0.833
MCINX009795 Melitaea cinxia MCINX009795 I 0.818
HHAL010561-PA Halyomorpha halys HHAL010561-PA I 0.818
BGIBMGA000377 Bombyx mori BGIBMGA000377 I 0.818
RPRC012403 Rhodnius prolixus RPRC012403 I 0.818
KGM_16662 Danaus plexippus KGM_16662 I 0.818
CPIJ011213 Culex quinquefasciatus CPIJ011213 I 0.803
HMEL007073 Heliconius melpomene HMEL007073 I 0.803
TC014742 Tribolium castaneum TC014742 I 0.803
CpipJ_CPIJ011213 Culex pipiens CpipJ_CPIJ011213 I 0.803
LLOJ008847 Lutzomyia longipalpis LLOJ008847 I 0.788
tetur15g00620 Tetranychus urticae tetur15g00620 I 0.788
SMAR011791 Strigamia maritima SMAR011791 I 0.788
LCUP008192 Lucilia cuprina LCUP008192 I 0.758
GA14466 Drosophila pseudoobscura FBgn0074494 I 0.742
LotgiG108358 Lottia gigantea LotgiG108358 N 0.742
CGI_10016910 Crassostrea gigas CGI_10016910 N 0.727
MDOA004026 Musca domestica MDOA004026 I 0.727
lin-28 Drosophila melanogaster FBgn0035626 D 0.727
CapteG179303 Capitella teleta CapteG179303 N 0.727
DAPPUDRAFT_52316 Daphnia pulex DAPPUDRAFT_52316 N 0.712
HelroG163427 Helobdella robusta HelroG163427 N 0.712