CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDOA004026
(
Musca domestica
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
MDOA004026
T165704_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lin-28
M03713_2.00
Drosophila melanogaster
KCGTGTAGGTCGGTGGB
VCCACCGACCTACACGM
SELEX
Nitta et al.(2015)
lin-28_1
0.879
0.879
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA004026-PA
CSD
60
125
RYGKCKWFNVAKGWGFLTPNDGGHEVFVHQSIIQMSGFRSLGEQEEVEFECHLTERGLEATRVSGI
Links
Other
CSD
family TFs
Other
Musca domestica
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LCUP008192
Lucilia cuprina
LCUP008192
I
0.909
GA14466
Drosophila pseudoobscura
FBgn0074494
I
0.894
lin-28
Drosophila melanogaster
FBgn0035626
D
0.879
TC014742
Tribolium castaneum
TC014742
I
0.773
AMIN007802
Anopheles minimus
AMIN007802
I
0.758
LLOJ008847
Lutzomyia longipalpis
LLOJ008847
I
0.758
AFUN002605
Anopheles funestus
AFUN002605
I
0.758
AFAF013794
Anopheles farauti
AFAF013794
I
0.758
ACUA024423
Anopheles culicifacies
ACUA024423
I
0.742
tetur15g00620
Tetranychus urticae
tetur15g00620
I
0.742
ASIS012373
Anopheles sinensis
ASIS012373
I
0.742
ASTEI02701
Anopheles stephensi
ASTEI02701
I
0.742
AALB005062
Anopheles albimanus
AALB005062
I
0.742
RPRC012403
Rhodnius prolixus
RPRC012403
I
0.742
HMEL007073
Heliconius melpomene
HMEL007073
I
0.742
MCINX009795
Melitaea cinxia
MCINX009795
I
0.727
AEPI008253
Anopheles epiroticus
AEPI008253
I
0.727
AMEC021668
Anopheles melas
AMEC021668
I
0.727
AQUA004698
Anopheles quadriannulatus
AQUA004698
I
0.727
BGIBMGA000377
Bombyx mori
BGIBMGA000377
I
0.727
KGM_16662
Danaus plexippus
KGM_16662
I
0.727
ADIR007387
Anopheles dirus
ADIR007387
I
0.727
AGAP006591
Anopheles gambiae
AGAP006591
I
0.727
HHAL010561-PA
Halyomorpha halys
HHAL010561-PA
I
0.727
AARA008465
Anopheles arabiensis
AARA008465
I
0.727
AATE020348
Anopheles atroparvus
AATE020348
I
0.727
ACOM039486
Anopheles coluzzii
ACOM039486
I
0.727
ACHR009791
Anopheles christyi
ACHR009791
I
0.727
CPIJ011213
Culex quinquefasciatus
CPIJ011213
I
0.712
MESCA008074
Megaselia scalaris
MESCA008074
N
0.712
SMAR011791
Strigamia maritima
SMAR011791
I
0.712
CpipJ_CPIJ011213
Culex pipiens
CpipJ_CPIJ011213
I
0.712