CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf18710-augustus-gene-0.3
(
Meloidogyne floridensis
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
maker-nMf.1.1.scaf18710-augustus-gene-0.3
T165835_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf18710-augustus-gene-0.3-mRNA-1
CSD
1
55
YGFIRVDGSEKDCFVHASAILRTVNVPLALIENQQVEFDIIEGLKGPEAVCVSGP
Links
Other
CSD
family TFs
Other
Meloidogyne floridensis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc04108
Meloidogyne incognita
Minc04108
N
1.000
Minc06167
Meloidogyne incognita
Minc06167
N
1.000
Minc01289
Meloidogyne incognita
Minc01289
N
1.000
Minc02620
Meloidogyne incognita
Minc02620
N
1.000
Minc01631
Meloidogyne incognita
Minc01631
N
1.000
MhA1_Contig1131.frz3.gene4
Meloidogyne hapla
MhA1_Contig1131.frz3.gene4
N
0.962
MhA1_Contig1253.frz3.gene6
Meloidogyne hapla
MhA1_Contig1253.frz3.gene6
N
0.943
Minc02595
Meloidogyne incognita
Minc02595
N
0.830