SROB_0000337801 (Schistosoma rodhaini)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 SROB_0000337801 T165900_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_097750
M01208_2.00 		Schistosoma mansoni
TAGATAGA
TCTATCTA		 PBM
Lambert et al.(2019)
pTH7807 		1.000 1.000
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000337801-mRNA-1 CSD 18 87

Links

Other CSD family TFs
Other Schistosoma rodhaini TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_097750 Schistosoma mansoni Smp_097750 D 1.000
SCUD_0000800101 Schistosoma curassoni SCUD_0000800101 I 1.000
Sjc_0026800 Schistosoma japonicum Sjc_0026800 I 1.000
A_06056 Schistosoma haematobium A_06056 I 1.000
SMTD_0000035001 Schistosoma mattheei SMTD_0000035001 I 1.000
TRE_0000940901 Trichobilharzia regenti TRE_0000940901 I 0.970
Sjc_0001400 Schistosoma japonicum Sjc_0001400 I 0.864
Smp_097800 Schistosoma mansoni Smp_097800 I 0.864
SCUD_0000012301 Schistosoma curassoni SCUD_0000012301 I 0.864
SMRZ_0001938001 Schistosoma margrebowiei SMRZ_0001938001 I 0.864
SMTD_0001373001 Schistosoma mattheei SMTD_0001373001 I 0.864
SROB_0000030901 Schistosoma rodhaini SROB_0000030901 I 0.864
TRE_0000129901 Trichobilharzia regenti TRE_0000129901 I 0.833
T265_14198 Opisthorchis viverrini T265_14198 I 0.758
csin111107 Clonorchis sinensis csin111107 I 0.758
ECPE_0000786301 Echinostoma caproni ECPE_0000786301 I 0.758
CRE01789 Caenorhabditis remanei CRE01789 I 0.727
Hba_02103 Heterorhabditis bacteriophora Hba_02103 I 0.727
DAPPUDRAFT_311200 Daphnia pulex DAPPUDRAFT_311200 I 0.727
ACOC_0000576201 Angiostrongylus costaricensis ACOC_0000576201 I 0.727
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.727
DICVIV_10680 Dictyocaulus viviparus DICVIV_10680 I 0.727
CBG02981 Caenorhabditis briggsae CBG02981 I 0.727
CJA05984 Caenorhabditis japonica CJA05984 I 0.727
CBN16711 Caenorhabditis brenneri CBN16711 I 0.727
ACAC_0000909201 Angiostrongylus cantonensis ACAC_0000909201 I 0.727
TMUE_s0011007500 Trichuris muris TMUE_s0011007500 I 0.727
TTRE_0000405201 Trichuris trichiura TTRE_0000405201 I 0.712
ISCW005281 Ixodes scapularis ISCW005281 I 0.712
ENSMLUG00000008292 Myotis lucifugus ENSMLUG00000008292 I 0.712
SVUK_0001307901 Strongylus vulgaris SVUK_0001307901 I 0.712
cey-1 Caenorhabditis elegans WBGene00000472 D 0.712
T265_06248 Opisthorchis viverrini T265_06248 I 0.712
TELCIR_06115 Teladorsagia circumcincta TELCIR_06115 I 0.712
nRc.2.0.1.g10725 Romanomermis culicivorax nRc.2.0.1.g10725 I 0.712
D918_04890 Trichuris suis D918_04890 I 0.712
HCOI01877200 Haemonchus contortus HCOI01877200 I 0.712
D915_00091 Fasciola hepatica D915_00091 I 0.712
ANCDUO_02786 Ancylostoma duodenale ANCDUO_02786 I 0.712
ANCCAN_14498 Ancylostoma caninum ANCCAN_14498 I 0.712
ANCCEY_03875 Ancylostoma ceylanicum ANCCEY_03875 I 0.712
HPBE_0000695301 Heligmosomoides bakeri HPBE_0000695301 I 0.712
HPLM_0000375501 Haemonchus placei HPLM_0000375501 I 0.712
OESDEN_18169 Oesophagostomum dentatum OESDEN_18169 I 0.712
SBAD_0000071701 Soboliphyme baturini SBAD_0000071701 I 0.712
NECAME_15956 Necator americanus NECAME_15956 I 0.712
NBR_0000795701 Nippostrongylus brasiliensis NBR_0000795701 I 0.712
L889_g15794 Steinernema feltiae L889_g15794 I 0.712
CLEC013417 Cimex lectularius CLEC013417 I 0.700