ENSCSAVG00000010744 (Ciona savignyi)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSCSAVG00000010744 T166042_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.710 0.710
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN

NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.721 0.721
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.721 0.721
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN

NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.721 0.721
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN

NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.710 0.710
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN

NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.710 0.710
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.710 0.710
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB

VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.710 0.710
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN

NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.710 0.710
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN

NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.721 0.721
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV

BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.721 0.721
RBPJ
M10413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.721 0.721
RBPJ
M10414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000018281 CSL 75 205
ENSCSAVP00000018282 CSL 29 159
ENSCSAVP00000018283 CSL 16 180

Links

Other CSL family TFs
Other Ciona savignyi TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.700
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.721
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.721
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.702
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.721
GB45655 Apis mellifera GB45655 I 0.721
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.702
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.752
ACEP17167 Atta cephalotes ACEP17167 I 0.721
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.713
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.721
RBPJ Bos taurus ENSBTAG00000003602 I 0.721
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.702
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.702
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.721
Aan_R011115 Calypte anna Aan_R011115 I 0.702
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.715
RBPJ Canis familiaris ENSCAFG00000016387 I 0.721
CapteG179039 Capitella teleta CapteG179039 I 0.710
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.709
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.721
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.721
CLEC005205 Cimex lectularius CLEC005205 I 0.736
su(h) Ciona intestinalis ENSCING00000000838 I 0.931
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.718
KGM_08407 Danaus plexippus KGM_08407 I 0.713
rbpjb Danio rerio ENSDARG00000052091 I 0.736
rbpja Danio rerio ENSDARG00000003398 I 0.760
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.721
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.715
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.721
RBPJ Equus caballus ENSECAG00000019257 I 0.721
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.721
D915_08967 Fasciola hepatica D915_08967 I 0.833
D915_08968 Fasciola hepatica D915_08968 I 0.712
RBPJ Felis catus ENSFCAG00000030363 I 0.708
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.702
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.722
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.736
RBPJ Gallus gallus ENSGALG00000014365 I 0.702
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.736
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.702
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.721
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.731
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.713
HMEL017244 Heliconius melpomene HMEL017244 I 0.713
RBPJ Homo sapiens ENSG00000168214 D 0.812
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.721
ISCW010197 Ixodes scapularis ISCW010197 I 0.713
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.721
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.721
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.729
LotgiG159505 Lottia gigantea LotgiG159505 I 0.729
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.721
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.721
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.721
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.713
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.765
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.721
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.721
Rbpj Mus musculus ENSMUSG00000039191 D 0.721
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.721
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.721
NV17858 Nasonia vitripennis NV17858 I 0.713
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.721
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.718
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.729
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.721
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.721
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.721
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.721
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.721
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.721
PHUM462870 Pediculus humanus PHUM462870 I 0.721
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.721
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.710
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.736
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.721
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.721
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.714
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.721
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.721
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.713
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.721
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.833
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.833
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.833
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.833
SINV15808 Solenopsis invicta SINV15808 I 0.721
RBPJ Sorex araneus ENSSARG00000001169 I 0.721
SMAR001432 Strigamia maritima SMAR001432 I 0.713
RBPJ Sus scrofa ENSSSCG00000022155 I 0.721
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.702
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.718
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.721
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.710
TC014468 Tribolium castaneum TC014468 I 0.729
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.833
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.721
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.721
Tal_R001466 Tyto alba Tal_R001466 I 0.702
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.833
rbpj.S Xenopus laevis XB-GENE-865998 I 0.718
AAB05479 Xenopus laevis AAB05479 I 0.718
rbpj Xenopus tropicalis XB-GENE-490756 I 0.721
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.721
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.710
L798_15068 Zootermopsis nevadensis L798_15068 I 0.721