RBPJ (Homo sapiens)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSG00000168214 T166060_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00		 Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2		 (Direct) (Direct)
RBPJ
M00736_2.00		 Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4		 (Direct) (Direct)
RBPJ
M00737_2.00		 Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1		 (Direct) (Direct)
RBPJ
M00738_2.00		 Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1		 (Direct) (Direct)
RBPJ
M00739_2.00		 Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His		 (Direct) (Direct)
RBPJ
M00740_2.00		 Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2		 (Direct) (Direct)
RBPJ
M00741_2.00		 Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2		 (Direct) (Direct)
RBPJ
M00742_2.00		 Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5		 (Direct) (Direct)
RBPJ
M08105_2.00		 Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1		 (Direct) (Direct)
RBPJ
M09020_2.00		 Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A		 (Direct) (Direct)
RBPJ
M10413_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01		 (Direct) (Direct)
RBPJ
M10414_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		1.000 1.000
Rbpjl
M09519_2.00 		Mus musculus
NDTTCCCABR
YVTGGGAAHN		 Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459 		0.938 0.938
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.794 0.794
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00735_2.00 CSL 25 155
M00736_2.00 CSL 25 155
M00737_2.00 CSL 25 155
M00738_2.00 CSL 25 155
M00739_2.00 CSL 25 155
M00740_2.00 CSL 25 155
M00741_2.00 CSL 25 155
M00742_2.00 CSL 25 155

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000305815 CSL 33 163
ENSP00000339699 CSL 35 165
ENSP00000340124 CSL 34 164
ENSP00000345206 CSL 48 178
ENSP00000347659 CSL 34 164
ENSP00000354528 CSL 48 178
ENSP00000422617 CSL 13 143
ENSP00000422838 CSL 34 107
ENSP00000423406 CSL 13 143
ENSP00000423575 CSL 34 110
ENSP00000423644 CSL 48 178
ENSP00000423703 CSL 34 164
ENSP00000423907 CSL 13 143
ENSP00000424459 CSL 13 143
ENSP00000424789 CSL 34 94
ENSP00000424804 CSL 34 49
ENSP00000424989 CSL 34 48
ENSP00000425061 CSL 34 113
ENSP00000425750 CSL 34 97
ENSP00000427170 CSL 71 201
ENSP00000427344 CSL 35 53

Links

Other CSL family TFs
Other Homo sapiens TFs

Invalid Input OrderBy

319 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action