Rbpj (Rattus norvegicus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSRNOG00000046327 T166124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
1.000 1.000
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN

NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
1.000 1.000
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
1.000 1.000
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN

NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
1.000 1.000
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN

NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
1.000 1.000
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN

NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
1.000 1.000
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
1.000 1.000
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB

VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
1.000 1.000
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN

NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
1.000 1.000
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN

NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
1.000 1.000
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV

BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
1.000 1.000
RBPJ
M10413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
1.000 1.000
RBPJ
M10414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
1.000 1.000
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY

RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.794 0.794
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV

BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000065485 CSL 13 143

Links

Other CSL family TFs
Other Rattus norvegicus TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA014540 Oryza indica BGIOSGA014540 N 0.000
BRADI5G18430 Brachypodium distachyon BRADI5G18430 N 0.000
F775_07886 Aegilops tauschii F775_07886 N 0.000
GRMZM2G057131 Zea mays GRMZM2G057131 N 0.000
GRMZM2G472589 Zea mays GRMZM2G472589 N 0.000
LPERR04G17810 Leersia perrieri LPERR04G17810 N 0.000
MDP0000291622 Malus domestica MDP0000291622 N 0.000
MLOC_11130 Hordeum vulgare MLOC_11130 N 0.000
OB04G28790 Oryza brachyantha OB04G28790 N 0.000
OBART04G21780 Oryza barthii OBART04G21780 N 0.000
OGLUM04G21810 Oryza glumaepatula OGLUM04G21810 N 0.000
OLONG_013577 Oryza longistaminata OLONG_013577 N 0.000
OMERI04G18340 Oryza meridionalis OMERI04G18340 N 0.000
ONIVA04G20320 Oryza nivara ONIVA04G20320 N 0.000
OPUNC04G19530 Oryza punctata OPUNC04G19530 N 0.000
ORGLA04G0188200 Oryza glaberrima ORGLA04G0188200 N 0.000
ORUFI09G04820 Oryza rufipogon ORUFI09G04820 N 0.000
OS04G0564000 Oryza sativa OS04G0564000 N 0.000
Pavir.Ga01021 Panicum virgatum Pavir.Ga01021 N 0.000
Pavir.J21884 Panicum virgatum Pavir.J21884 N 0.000
Sb06g025420 Sorghum bicolor Sb06g025420 N 0.000
Si010837m.g Setaria italica Si010837m.g N 0.000
Si012648m.g Setaria italica Si012648m.g N 0.000
Traes_2AL_39432DCB1 Triticum aestivum Traes_2AL_39432DCB1 N 0.000
Traes_2AL_BC4CD296F Triticum aestivum Traes_2AL_BC4CD296F N 0.000
Traes_2BL_7BC3DF5C7 Triticum aestivum Traes_2BL_7BC3DF5C7 N 0.000
Traes_2BL_E8D551BE0 Triticum aestivum Traes_2BL_E8D551BE0 N 0.000
Traes_2DL_92641C6CC Triticum aestivum Traes_2DL_92641C6CC N 0.000
Traes_2DL_D8AD25F43 Triticum aestivum Traes_2DL_D8AD25F43 N 0.000
TRIUR3_21912 Triticum urartu TRIUR3_21912 N 0.000
TRIUR3_21913 Triticum urartu TRIUR3_21913 N 0.000