CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000013207
(
Sarcophilus harrisii
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
ENSSHAG00000013207
T166127_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rbpjl
M09519_2.00
Mus musculus
NDTTCCCABR
YVTGGGAAHN
Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459
0.724
0.724
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000015497
CSL
64
199
VRILHAKVAQKSYGSEKRFFCPPPCVYLSGPGWRLKPEQGQANEAGDTAGCTVCGYMGLDGGSTETQKLSFEEQLDSREFACAKALYISDSDKRKHFRLVLRLVFRGGQELGTFHSHLIKVISKPSQKKQSLKNTD
Links
Other
CSL
family TFs
Other
Sarcophilus harrisii
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_01047
Colletotrichum fioriniae
CFIO01_01047
I
0.000
CH063_09542
Colletotrichum higginsianum
CH063_09542
I
0.000
Cob_09074
Colletotrichum orbiculare
Cob_09074
I
0.000
CSUB01_10917
Colletotrichum sublineola
CSUB01_10917
I
0.000
estExt_Genewise1Plus.C_10156
Neurospora discreta
estExt_Genewise1Plus.C_10156
I
0.000
GLRG_09393
Colletotrichum graminicola
GLRG_09393
I
0.000
NCU01122
Neurospora crassa
NCU01122
D
0.000
PODANS_2_7560
Podospora anserina
PODANS_2_7560
I
0.000
SMAC_03196
Sordaria macrospora
SMAC_03196
I
0.000
TRIATDRAFT_295810
Trichoderma atroviride
TRIATDRAFT_295810
I
0.000
TRIVIDRAFT_203114
Trichoderma virens
TRIVIDRAFT_203114
I
0.000