CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R005402
(
Geospiza fortis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
Gfo_R005402
T166304_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rbpjl
M09519_2.00
Mus musculus
NDTTCCCABR
YVTGGGAAHN
Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459
0.742
0.742
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R005402
CSL
26
163
VLILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWKLKQEQIKARDLGEAGFRVCGYMGLDSMGSSLMETQKLSFEEQPDAKGFSCAKALYISDTDKRKHFRLVLKLFFSNGQEIGTFHSKLIKVISKPSQKKQSLKNTD
Links
Other
CSL
family TFs
Other
Geospiza fortis
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy