Ocbimv22031643m.g (Octopus bimaculoides)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 Ocbimv22031643m.g T166334_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.855 0.855
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN

NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.855 0.855
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.855 0.855
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN

NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.855 0.855
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN

NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.855 0.855
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN

NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.855 0.855
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.855 0.855
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB

VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.855 0.855
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN

NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.855 0.855
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN

NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.855 0.855
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV

BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.855 0.855
RBPJ
M10413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.855 0.855
RBPJ
M10414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.855 0.855
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY

RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.794 0.794
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV

BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22031643m.p CSL 262 392
Ocbimv22031644m.p CSL 249 379
Ocbimv22031645m.p CSL 234 364
Ocbimv22031646m.p CSL 221 351
Ocbimv22031647m.p CSL 93 223
Ocbimv22031648m.p CSL 106 236
Ocbimv22031649m.p CSL 148 278

Links

Other CSL family TFs
Other Octopus bimaculoides TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.885
RBPJ Homo sapiens ENSG00000168214 D 0.875
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.870
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.864
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.863
RBPJ Gallus gallus ENSGALG00000014365 I 0.863
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.863
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.863
Tal_R001466 Tyto alba Tal_R001466 I 0.863
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.863
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.863
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.863
Aan_R011115 Calypte anna Aan_R011115 I 0.863
Rbpj Mus musculus ENSMUSG00000039191 D 0.855
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.855
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.855
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.855
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.855
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.855
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.855
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.855
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.855
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.855
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.855
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.855
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.855
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.855
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.855
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.855
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.855
RBPJ Sus scrofa ENSSSCG00000022155 I 0.855
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.855
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.855
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.855
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.855
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.855
RBPJ Sorex araneus ENSSARG00000001169 I 0.855
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.855
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.855
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.855
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.855
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.855
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.855
RBPJ Equus caballus ENSECAG00000019257 I 0.855
RBPJ Canis familiaris ENSCAFG00000016387 I 0.855
RBPJ Bos taurus ENSBTAG00000003602 I 0.855
rbpj Xenopus tropicalis XB-GENE-490756 I 0.855
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.855
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.855
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.855
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.855
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.855
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.855
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.855
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.855
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.855
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.855
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.855
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.847
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.847
AAB05479 Xenopus laevis AAB05479 I 0.847
CapteG179039 Capitella teleta CapteG179039 I 0.847
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.847
rbpj.S Xenopus laevis XB-GENE-865998 I 0.847
LotgiG159505 Lottia gigantea LotgiG159505 I 0.840
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.840
rbpjb Danio rerio ENSDARG00000052091 I 0.840
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.840
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.832
SMAR001432 Strigamia maritima SMAR001432 I 0.832
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.824
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.824
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.824
RBPJ Felis catus ENSFCAG00000030363 I 0.815
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.811
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.806
KGM_08407 Danaus plexippus KGM_08407 I 0.802
rbpja Danio rerio ENSDARG00000003398 I 0.802
HMEL017244 Heliconius melpomene HMEL017244 I 0.802
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.794
L798_15068 Zootermopsis nevadensis L798_15068 I 0.794
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.794
Su(H) Drosophila melanogaster FBgn0004837 D 0.794
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.794
GH10915 Drosophila grimshawi FBgn0118396 I 0.794
Su(H) Drosophila simulans FBgn0027417 I 0.794
GF14905 Drosophila ananassae FBgn0091930 I 0.794
GG25142 Drosophila erecta FBgn0117267 I 0.794
GL26026 Drosophila persimilis FBgn0163608 I 0.794
GJ11880 Drosophila virilis FBgn0199134 I 0.794
GM15894 Drosophila sechellia FBgn0170810 I 0.794
GE20814 Drosophila yakuba FBgn0238107 I 0.794
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.786
LCUP003485 Lucilia cuprina LCUP003485 I 0.786
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.786
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.786
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.786
TC014468 Tribolium castaneum TC014468 I 0.786
NV17858 Nasonia vitripennis NV17858 I 0.786
ISCW010197 Ixodes scapularis ISCW010197 I 0.786
GI13259 Drosophila mojavensis FBgn0136016 I 0.786
MDOA002342 Musca domestica MDOA002342 I 0.786
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.785
MESCA005881 Megaselia scalaris MESCA005881 I 0.780
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.779
ACEP17167 Atta cephalotes ACEP17167 I 0.779
SINV15808 Solenopsis invicta SINV15808 I 0.779
GB45655 Apis mellifera GB45655 I 0.779
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.777
PHUM462870 Pediculus humanus PHUM462870 I 0.771
CLEC005205 Cimex lectularius CLEC005205 I 0.771
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.771
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.771
AAEL006419 Aedes aegypti AAEL006419 I 0.763
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.763
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.756
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.744
rbpja Oryzias latipes ENSORLG00000004882 I 0.744
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.744
AFAF012186 Anopheles farauti AFAF012186 I 0.740
AFUN007280 Anopheles funestus AFUN007280 I 0.740
ADIR011431 Anopheles dirus ADIR011431 I 0.740
AMEM004324 Anopheles merus AMEM004324 I 0.740
SPER_0003199901 Spirometra erinaceieuropaei SPER_0003199901 I 0.740
HelroG186992 Helobdella robusta HelroG186992 I 0.740
DILT_0001372901 Diphyllobothrium latum DILT_0001372901 I 0.740
AMIN005880 Anopheles minimus AMIN005880 I 0.740
ACOM040639 Anopheles coluzzii ACOM040639 I 0.740
ACUA014515 Anopheles culicifacies ACUA014515 I 0.740
AGAP008935 Anopheles gambiae AGAP008935 I 0.740
AALB007981 Anopheles albimanus AALB007981 I 0.740
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.734
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.733
AATE009298 Anopheles atroparvus AATE009298 I 0.733
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.733
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.728
D915_08968 Fasciola hepatica D915_08968 I 0.727
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.725
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.725
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.721
ASIS021327 Anopheles sinensis ASIS021327 I 0.720
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.718
NECAME_17145 Necator americanus NECAME_17145 I 0.714
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.714
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.710
NV17967 Nasonia vitripennis NV17967 I 0.710
ACYPI009607 Acyrthosiphon pisum ACYPI009607 I 0.710
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.702