Sjc_0108400 (Schistosoma japonicum)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 Sjc_0108400 T166347_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.833 0.833
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN

NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.833 0.833
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.833 0.833
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN

NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.833 0.833
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN

NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.833 0.833
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN

NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.833 0.833
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.833 0.833
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB

VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.833 0.833
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN

NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.833 0.833
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN

NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.833 0.833
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV

BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.833 0.833
Rbpjl
M09519_2.00
Mus musculus
NDTTCCCABR

YVTGGGAAHN
Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459
0.833 0.833
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY

RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.833 0.833
RBPJ
M10413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.833 0.833
RBPJ
M10414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.833 0.833
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV

BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000010204 CSL 320 337

Links

Other CSL family TFs
Other Schistosoma japonicum TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29929.m004752 Ricinus communis 29929.m004752 I 0.000
Aquca_011_00344 Aquilegia coerulea Aquca_011_00344 I 0.000
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I 0.000
ARR11 Arabidopsis thaliana AT1G67710 D 0.000
ARR11 Arabidopsis lyrata scaffold_201596.1 I 0.000
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.000
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.000
Bo6g098710 Brassica oleracea Bo6g098710 I 0.000
Bo6g105120 Brassica oleracea Bo6g105120 I 0.000
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.000
Bostr.26959s0139 Boechera stricta Bostr.26959s0139 I 0.000
Bra004076 Brassica rapa Bra004076 I 0.000
Bra004245 Brassica rapa Bra004245 I 0.000
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I 0.000
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.000
Cagra.2261s0012 Capsella grandiflora Cagra.2261s0012 I 0.000
Carubv10020133m.g Capsella rubella Carubv10020133m.g I 0.000
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.000
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.000
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.000
Ca_11309 Cicer arietinum Ca_11309 I 0.000
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I 0.000
Cla023064 Citrullus lanatus Cla023064 I 0.000
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.000
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I 0.000
Eucgr.H04694 Eucalyptus grandis Eucgr.H04694 I 0.000
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.000
F775_27736 Aegilops tauschii F775_27736 I 0.000
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.000
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.000
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.000
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.000
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.000
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.000
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.000
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.000
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.000
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.000
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.000
Lus10006446.g Linum usitatissimum Lus10006446.g I 0.000
Lus10011389.g Linum usitatissimum Lus10011389.g I 0.000
MDP0000305167 Malus domestica MDP0000305167 I 0.000
MDP0000307383 Malus domestica MDP0000307383 I 0.000
MDP0000320381 Malus domestica MDP0000320381 I 0.000
mgf000016m Mimulus guttatus mgf000016m I 0.000
mgf004388m Mimulus guttatus mgf004388m I 0.000
mgf013006m Mimulus guttatus mgf013006m I 0.000
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.000
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.000
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.000
OB01G49660 Oryza brachyantha OB01G49660 I 0.000
OBART01G40940 Oryza barthii OBART01G40940 I 0.000
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.000
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.000
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.000
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.000
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.000
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I 0.000
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.000
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.000
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.000
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.000
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I 0.000
PGSC0003DMG400011980 Solanum tuberosum PGSC0003DMG400011980 I 0.000
PK07924.1 Cannabis sativa PK07924.1 D 0.000
Pm006838 Prunus mume Pm006838 I 0.000
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.000
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I 0.000
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.000
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.000
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.000
RR26 Oryza sativa OS01G0904700 I 0.000
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.000
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.000
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I 0.000
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.000
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.000
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.000
Si000815m.g Setaria italica Si000815m.g I 0.000
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I 0.000
TCM_010701 Theobroma cacao TCM_010701 I 0.000
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.000
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.000
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.000
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.000
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.000
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I 0.000