augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 (Meloidogyne floridensis)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 T166390_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Rbpjl
M09519_2.00
Mus musculus
NDTTCCCABR

YVTGGGAAHN
Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459
0.882 0.882
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.824 0.824
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN

NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.824 0.824
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.824 0.824
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN

NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.824 0.824
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN

NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.824 0.824
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN

NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.824 0.824
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.824 0.824
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB

VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.824 0.824
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN

NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.824 0.824
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN

NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.824 0.824
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV

BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.824 0.824
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY

RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.824 0.824
RBPJ
M10413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.824 0.824
RBPJ
M10414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.824 0.824
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV

BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.824 0.824
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0-mRNA-1 CSL 20 36

Links

Other CSL family TFs
Other Meloidogyne floridensis TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL006419 Aedes aegypti AAEL006419 I 0.824
AALB007981 Anopheles albimanus AALB007981 I 0.824
Aan_R003297 Calypte anna Aan_R003297 N 0.824
AATE009298 Anopheles atroparvus AATE009298 I 0.824
ACEP17167 Atta cephalotes ACEP17167 I 0.824
ACOC_0000571401 Angiostrongylus costaricensis ACOC_0000571401 N 0.882
ACOM040639 Anopheles coluzzii ACOM040639 I 0.824
ACUA014515 Anopheles culicifacies ACUA014515 I 0.824
ACYPI009607 Acyrthosiphon pisum ACYPI009607 I 0.706
ADIR011431 Anopheles dirus ADIR011431 I 0.824
AFAF012186 Anopheles farauti AFAF012186 I 0.824
AFUN007280 Anopheles funestus AFUN007280 I 0.824
AGAP008935 Anopheles gambiae AGAP008935 I 0.824
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.824
AMEM004324 Anopheles merus AMEM004324 I 0.824
AMIN005880 Anopheles minimus AMIN005880 I 0.824
ANCCAN_18251 Ancylostoma caninum ANCCAN_18251 N 0.882
ANCCEY_02118 Ancylostoma ceylanicum ANCCEY_02118 N 0.882
Aqu1.226412 Amphimedon queenslandica Aqu1.226412 N 0.765
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.824
ASU_12051 Ascaris suum ASU_12051 N 0.882
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.824
Bm4897 Brugia malayi Bm4897 N 0.882
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.714
BXY_0759400 Bursaphelenchus xylophilus BXY_0759400 N 0.882
CAOG_01024 Capsaspora owczarzaki CAOG_01024 N 0.706
CapteG179039 Capitella teleta CapteG179039 I 0.765
CBG05522 Caenorhabditis briggsae CBG05522 N 0.882
CBN18395 Caenorhabditis brenneri CBN18395 N 0.765
CBN23808 Caenorhabditis brenneri CBN23808 N 0.882
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.824
CJA05333 Caenorhabditis japonica CJA05333 N 0.882
CJA27924 Caenorhabditis japonica CJA27924 N 0.882
CLEC005205 Cimex lectularius CLEC005205 I 0.824
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.824
Cmyd_10015219 Chelonia mydas Cmyd_10015219 I 0.765
CRE16913 Caenorhabditis remanei CRE16913 N 0.882
CRE27979 Caenorhabditis remanei CRE27979 N 0.882
csin105722 Clonorchis sinensis csin105722 N 0.765
D915_08967 Fasciola hepatica D915_08967 I 0.765
D917_02250 Trichinella nativa D917_02250 N 0.824
D917_07087 Trichinella nativa D917_07087 N 0.824
D917_09819 Trichinella nativa D917_09819 N 0.824
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.824
DICVIV_03671 Dictyocaulus viviparus DICVIV_03671 N 0.882
DILT_0001373001 Diphyllobothrium latum DILT_0001373001 N 0.706
ECPE_0001338601 Echinostoma caproni ECPE_0001338601 I 0.765
EEL_0000947001 Elaeophora elaphi EEL_0000947001 N 0.882
EFV48244 Trichinella spiralis EFV48244 N 0.824
EFV61345 Trichinella spiralis EFV61345 N 0.824
ENSAMEG00000004221 Ailuropoda melanoleuca ENSAMEG00000004221 N 0.824
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.824
ENSAMXG00000008068 Astyanax mexicanus ENSAMXG00000008068 N 0.765
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.824
ENSAPLG00000008031 Anas platyrhynchos ENSAPLG00000008031 I 0.824
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.824
ENSCSAG00000014350 Chlorocebus sabaeus ENSCSAG00000014350 I 0.824
ENSCSAVG00000001400 Ciona savignyi ENSCSAVG00000001400 N 0.824
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.765
ENSGACG00000000023 Gasterosteus aculeatus ENSGACG00000000023 N 0.824
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.824
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.824
ENSLOCG00000007645 Lepisosteus oculatus ENSLOCG00000007645 N 0.824
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.824
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.824
ENSMPUG00000017637 Mustela putorius furo ENSMPUG00000017637 I 0.824
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.824
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.824
ENSONIG00000005364 Oreochromis niloticus ENSONIG00000005364 N 0.824
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.824
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.824
ENSP00000341243 Macaca fascicularis ENSP00000341243 I 0.824
ENSP00000341243-D1 Bos grunniens ENSP00000341243-D1 I 0.882
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.824
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.824
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.765
ENSPFOG00000016929 Poecilia formosa ENSPFOG00000016929 N 0.824
ENSPPYG00000011053 Pongo abelii ENSPPYG00000011053 I 0.824
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.824
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.824
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.824
ENSSHAG00000013207 Sarcophilus harrisii ENSSHAG00000013207 I 0.765
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.824
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.824
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.824
ENSXMAG00000003601 Xiphophorus maculatus ENSXMAG00000003601 N 0.824
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.765
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.824
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.824
GB45655 Apis mellifera GB45655 I 0.824
GE20814 Drosophila yakuba FBgn0238107 I 0.824
GF14905 Drosophila ananassae FBgn0091930 I 0.824
GG25142 Drosophila erecta FBgn0117267 I 0.824
GH10915 Drosophila grimshawi FBgn0118396 I 0.824
GI13259 Drosophila mojavensis FBgn0136016 I 0.824
GJ11880 Drosophila virilis FBgn0199134 I 0.824
GL26026 Drosophila persimilis FBgn0163608 I 0.824
GM15894 Drosophila sechellia FBgn0170810 I 0.824
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.824
Hba_17078 Heterorhabditis bacteriophora Hba_17078 N 0.882
HelroG186992 Helobdella robusta HelroG186992 I 0.765
HelroG190647 Helobdella robusta HelroG190647 N 0.765
HMEL017244 Heliconius melpomene HMEL017244 I 0.824
HmN_000214100 Hymenolepis microstoma HmN_000214100 N 0.706
HNAJ_0000209001 Hymenolepis nana HNAJ_0000209001 N 0.706
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.824
ISCW010197 Ixodes scapularis ISCW010197 I 0.824
KGM_08407 Danaus plexippus KGM_08407 I 0.824
L596_g13731 Steinernema carpocapsae L596_g13731 N 0.882
L798_15068 Zootermopsis nevadensis L798_15068 I 0.824
L889_g26868 Steinernema feltiae L889_g26868 N 0.882
L892_g16352 Steinernema scapterisci L892_g16352 N 0.824
L893_g21237 Steinernema glaseri L893_g21237 N 0.882
L898_g29972 Steinernema monticolum L898_g29972 N 0.882
lag-1 Caenorhabditis elegans WBGene00002245 N 0.882
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.824
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.824
LotgiG159505 Lottia gigantea LotgiG159505 I 0.824
M407DRAFT_244341 Tulasnella calospora M407DRAFT_244341 N 0.706
maker-nMf.1.1.scaf05143-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf05143-augustus-gene-0.4 N 0.765
Myotis_brandtii_RBPJL_10002478 Myotis brandtii Myotis_brandtii_RBPJL_10002478 I 0.824
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.824
nAv.1.0.1.g05527 Acanthocheilonema viteae nAv.1.0.1.g05527 N 0.882
nDi.2.2.2.g05496 Dirofilaria immitis nDi.2.2.2.g05496 N 0.882
NECAME_17145 Necator americanus NECAME_17145 I 0.714
NEMVEDRAFT_v1g206550 Nematostella vectensis NEMVEDRAFT_v1g206550 N 0.882
nLs.2.1.2.g01496 Litomosoides sigmodontis nLs.2.1.2.g01496 N 0.882
nOo.2.0.1.g00014 Onchocerca ochengi nOo.2.0.1.g00014 N 0.882
nRc.2.0.1.g21296 Romanomermis culicivorax nRc.2.0.1.g21296 N 0.824
NV17858 Nasonia vitripennis NV17858 I 0.824
NV17967 Nasonia vitripennis NV17967 I 0.824
OESDEN_00868 Oesophagostomum dentatum OESDEN_00868 N 0.882
Ogr10601 Ophisaurus gracilis Ogr10601 I 0.824
PHUM462870 Pediculus humanus PHUM462870 I 0.824
PPA16711 Pristionchus pacificus PPA16711 I 0.882
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.824
PXEA_0000033201 Protopolystoma xenopodis PXEA_0000033201 N 0.765
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.824
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.824
RBPJ Canis familiaris ENSCAFG00000016387 I 0.824
RBPJ Bos taurus ENSBTAG00000003602 I 0.824
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.824
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.824
RBPJ Equus caballus ENSECAG00000019257 I 0.824
RBPJ Homo sapiens ENSG00000168214 D 0.824
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.824
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.824
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.824
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.824
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.824
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.824
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.824
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.824
RBPJ Sus scrofa ENSSSCG00000022155 I 0.824
RBPJ Sorex araneus ENSSARG00000001169 I 0.824
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.824
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.824
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.824
rbpj Xenopus tropicalis XB-GENE-490756 I 0.824
RBPJ Vicugna pacos ENSVPAG00000003620 I 0.824
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.824
Rbpj Mus musculus ENSMUSG00000039191 D 0.824
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.824
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.824
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.824
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.824
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.824
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.824
rbpja Danio rerio ENSDARG00000003398 I 0.824
rbpjb Danio rerio ENSDARG00000052091 I 0.824
rbpjl Danio rerio ENSDARG00000074148 N 0.824
RBPJL Cavia porcellus ENSCPOG00000020407 I 0.824
RBPJL Equus caballus ENSECAG00000013463 I 0.882
Rbpjl Mus musculus ENSMUSG00000017007 D 0.882
RBPJL Monodelphis domestica ENSMODG00000016187 I 0.765
Rbpjl Rattus norvegicus ENSRNOG00000026295 I 0.824
RBPJL Macaca mulatta ENSMMUG00000003404 I 0.824
RBPJL Pan troglodytes ENSPTRG00000013542 I 0.824
RBPJL Otolemur garnettii ENSOGAG00000024900 I 0.824
RBPJL Ochotona princeps ENSOPRG00000011978 N 0.824
RBPJL Meleagris gallopavo ENSMGAG00000017264 I 0.824
RBPJL Canis familiaris ENSCAFG00000009670 I 0.824
RBPJL Loxodonta africana ENSLAFG00000008148 I 0.824
RBPJL Gallus gallus ENSGALG00000003952 I 0.824
RBPJL Echinops telfairi ENSETEG00000005066 I 0.824
RBPJL Oryctolagus cuniculus ENSOCUG00000009087 I 0.824
RPRC014254 Rhodnius prolixus RPRC014254 I 0.824
RSKR_0000739700 Rhabditophanes kr3021 RSKR_0000739700 N 0.882
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.824
SBAD_0000036101 Soboliphyme baturini SBAD_0000036101 N 0.882
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.882
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.765
SINV15808 Solenopsis invicta SINV15808 I 0.824
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.765
SMAR001432 Strigamia maritima SMAR001432 I 0.824
Smp_145970 Schistosoma mansoni Smp_145970 N 0.765
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.765
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.765
SMUV_0000453501 Syphacia muris SMUV_0000453501 N 0.765
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.882
SPAL_0001149300 Strongyloides papillosus SPAL_0001149300 N 0.824
SPU_021566 Strongylocentrotus purpuratus SPU_021566 N 0.824
SSTP_0000504800 Strongyloides stercoralis SSTP_0000504800 N 0.824
Su(H) Drosophila melanogaster FBgn0004837 D 0.824
Su(H) Drosophila simulans FBgn0027417 I 0.824
SVE_1985500 Strongyloides venezuelensis SVE_1985500 N 0.824
TASK_0000348801 Taenia asiatica TASK_0000348801 N 0.706
TC014468 Tribolium castaneum TC014468 I 0.824
TCLT_0000154801 Thelazia callipaeda TCLT_0000154801 N 0.882
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.765
TMUE_s0033000300 Trichuris muris TMUE_s0033000300 N 0.824
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.765
TriadG49676 Trichoplax adhaerens TriadG49676 N 0.824
TsM_000119200 Taenia solium TsM_000119200 N 0.706
V565_027550 Rhizoctonia solani V565_027550 N 0.706
WBGene00242124 Onchocerca volvulus WBGene00242124 N 0.882
WUBG_04020 Wuchereria bancrofti WUBG_04020 N 0.882