CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NBR_0002014201
(
Nippostrongylus brasiliensis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
NBR_0002014201
T166451_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0002014201-mRNA-1
CSL
15
40
ISIFHAKVAQKSYGNEKSDRMAQYLC
NBR_0002014201-mRNA-1
CSL
49
204
ISIFHAKVAQKSYGNEKRFFCPPPCIYLLGEGWKEKRNRVETLYKSFKEHQKRMGVAPELGPEHERISEQQASELCAFIGIGAPSDQERQQLDFSNGKDYCAAKTLYISDSDKRKYFELSIQFFYGCGVEIGLFLSQRIKVISKPSKKKQSMKNTD
Links
Other
CSL
family TFs
Other
Nippostrongylus brasiliensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00218000
Haemonchus contortus
HCOI00218000
N
0.988
OESDEN_00868
Oesophagostomum dentatum
OESDEN_00868
N
0.875
DICVIV_03671
Dictyocaulus viviparus
DICVIV_03671
N
0.875
HPLM_0000748001
Haemonchus placei
HPLM_0000748001
N
0.869
HCOI01422600
Haemonchus contortus
HCOI01422600
N
0.869
SVUK_0001898701
Strongylus vulgaris
SVUK_0001898701
N
0.774
ANCCAN_18250
Ancylostoma caninum
ANCCAN_18250
N
0.774
NBR_0000281601
Nippostrongylus brasiliensis
NBR_0000281601
N
0.774
MhA1_Contig445.frz3.gene2
Meloidogyne hapla
MhA1_Contig445.frz3.gene2
N
0.722
Hba_17078
Heterorhabditis bacteriophora
Hba_17078
N
0.702