SMUV_0001013801 (Syphacia muris)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 SMUV_0001013801 T166485_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.727 0.727
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN

NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.727 0.727
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.727 0.727
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN

NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.727 0.727
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN

NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.727 0.727
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN

NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.727 0.727
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.727 0.727
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB

VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.727 0.727
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN

NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.727 0.727
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN

NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.727 0.727
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV

BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.727 0.727
Rbpjl
M09519_2.00
Mus musculus
NDTTCCCABR

YVTGGGAAHN
Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459
0.727 0.727
RBPJ
M10413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.727 0.727
RBPJ
M10414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0001013801-mRNA-1 CSL 299 320

Links

Other CSL family TFs
Other Syphacia muris TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RBPJ Homo sapiens ENSG00000168214 D 0.895
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.882
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.857
Hba_17078 Heterorhabditis bacteriophora Hba_17078 N 0.818
nDi.2.2.2.g05496 Dirofilaria immitis nDi.2.2.2.g05496 N 0.818
nLs.2.1.2.g01496 Litomosoides sigmodontis nLs.2.1.2.g01496 N 0.818
ASU_12051 Ascaris suum ASU_12051 N 0.818
WBGene00242124 Onchocerca volvulus WBGene00242124 N 0.818
WUBG_04020 Wuchereria bancrofti WUBG_04020 N 0.818
ACOC_0000571401 Angiostrongylus costaricensis ACOC_0000571401 N 0.818
nOo.2.0.1.g00014 Onchocerca ochengi nOo.2.0.1.g00014 N 0.818
EEL_0000947001 Elaeophora elaphi EEL_0000947001 N 0.818
Bm4897 Brugia malayi Bm4897 N 0.818
NECAME_17145 Necator americanus NECAME_17145 I 0.810
CJA27924 Caenorhabditis japonica CJA27924 N 0.773
CRE16913 Caenorhabditis remanei CRE16913 N 0.773
BXY_0759400 Bursaphelenchus xylophilus BXY_0759400 N 0.773
CJA05333 Caenorhabditis japonica CJA05333 N 0.773
CBN23808 Caenorhabditis brenneri CBN23808 N 0.773
CBG05522 Caenorhabditis briggsae CBG05522 N 0.773
DICVIV_03671 Dictyocaulus viviparus DICVIV_03671 N 0.773
OESDEN_00868 Oesophagostomum dentatum OESDEN_00868 N 0.773
ANCCEY_02118 Ancylostoma ceylanicum ANCCEY_02118 N 0.773
TCLT_0000154801 Thelazia callipaeda TCLT_0000154801 N 0.773
NEMVEDRAFT_v1g206550 Nematostella vectensis NEMVEDRAFT_v1g206550 N 0.773
L898_g29972 Steinernema monticolum L898_g29972 N 0.773
SBAD_0000036101 Soboliphyme baturini SBAD_0000036101 N 0.773
L596_g13731 Steinernema carpocapsae L596_g13731 N 0.773
CRE27979 Caenorhabditis remanei CRE27979 N 0.773
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.727
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.727
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.727
ENSXMAG00000003601 Xiphophorus maculatus ENSXMAG00000003601 N 0.727
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.727
HMEL017244 Heliconius melpomene HMEL017244 I 0.727
KGM_08407 Danaus plexippus KGM_08407 I 0.727
RBPJL Pan troglodytes ENSPTRG00000013542 I 0.727
RBPJ Sorex araneus ENSSARG00000001169 I 0.727
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.727
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.727
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.727
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.727
RBPJ Sus scrofa ENSSSCG00000022155 I 0.727
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.727
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.727
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.727
Ogr10601 Ophisaurus gracilis Ogr10601 I 0.727
Myotis_brandtii_RBPJL_10002478 Myotis brandtii Myotis_brandtii_RBPJL_10002478 I 0.727
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.727
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.727
rbpj Xenopus tropicalis XB-GENE-490756 I 0.727
TMUE_s0033000300 Trichuris muris TMUE_s0033000300 N 0.727
RSKR_0000739700 Rhabditophanes kr3021 RSKR_0000739700 N 0.727
L892_g16352 Steinernema scapterisci L892_g16352 N 0.727
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.727
ENSP00000341243 Macaca fascicularis ENSP00000341243 I 0.727
SPU_021566 Strongylocentrotus purpuratus SPU_021566 N 0.727
PPA16711 Pristionchus pacificus PPA16711 I 0.727
NV17967 Nasonia vitripennis NV17967 I 0.727
Aan_R003297 Calypte anna Aan_R003297 N 0.727
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.727
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.727
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.727
NV17858 Nasonia vitripennis NV17858 I 0.727
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.727
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.727
RBPJL Equus caballus ENSECAG00000013463 I 0.727
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.727
rbpjl Danio rerio ENSDARG00000074148 N 0.727
rbpja Danio rerio ENSDARG00000003398 I 0.727
rbpjb Danio rerio ENSDARG00000052091 I 0.727
RBPJ Equus caballus ENSECAG00000019257 I 0.727
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.727
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.727
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.727
RBPJL Gallus gallus ENSGALG00000003952 I 0.727
ENSGACG00000000023 Gasterosteus aculeatus ENSGACG00000000023 N 0.727
RBPJL Echinops telfairi ENSETEG00000005066 I 0.727
ENSCSAVG00000001400 Ciona savignyi ENSCSAVG00000001400 N 0.727
ENSCSAG00000014350 Chlorocebus sabaeus ENSCSAG00000014350 I 0.727
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.727
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.727
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.727
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.727
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.727
ENSAPLG00000008031 Anas platyrhynchos ENSAPLG00000008031 I 0.727
RBPJ Bos taurus ENSBTAG00000003602 I 0.727
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.727
RBPJL Cavia porcellus ENSCPOG00000020407 I 0.727
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.727
RBPJ Canis familiaris ENSCAFG00000016387 I 0.727
RBPJL Canis familiaris ENSCAFG00000009670 I 0.727
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.727
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.727
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.727
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.727
RBPJL Oryctolagus cuniculus ENSOCUG00000009087 I 0.727
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.727
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.727
RBPJL Otolemur garnettii ENSOGAG00000024900 I 0.727
ENSONIG00000005364 Oreochromis niloticus ENSONIG00000005364 N 0.727
ENSPFOG00000016929 Poecilia formosa ENSPFOG00000016929 N 0.727
ENSPPYG00000011053 Pongo abelii ENSPPYG00000011053 I 0.727
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.727
RBPJL Ochotona princeps ENSOPRG00000011978 N 0.727
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.727
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.727
Rbpj Mus musculus ENSMUSG00000039191 D 0.727
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.727
RBPJL Meleagris gallopavo ENSMGAG00000017264 I 0.727
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.727
ENSLOCG00000007645 Lepisosteus oculatus ENSLOCG00000007645 N 0.727
RBPJL Loxodonta africana ENSLAFG00000008148 I 0.727
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.727
RBPJL Macaca mulatta ENSMMUG00000003404 I 0.727
ENSMPUG00000017637 Mustela putorius furo ENSMPUG00000017637 I 0.727
Rbpjl Mus musculus ENSMUSG00000017007 D 0.727
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.727
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.727
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.727
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.727
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.714