CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ014526
(
Culex pipiens
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
CpipJ_CPIJ014526
T166871_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ct
M06471_2.00
Drosophila melanogaster
YTRAAC
GTTYAR
B1H
Mathelier et al.(2014)
MA0218.1
0.948
0.948
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ014526-RA
CUT
422
498
ANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLL
CpipJ_CPIJ014526-RA
CUT
869
947
YNSLNTEDIVRRVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVAS
CpipJ_CPIJ014526-RA
CUT
1164
1242
TQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNVERLQML
CpipJ_CPIJ014526-RA
Homeodomain
1295
1351
KKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLATELGLSTRTITNWFHNHRMRLKQ
Links
Other
CUT,Homeodomain
family TFs
Other
Culex pipiens
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy