CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10022123
(
Crassostrea gigas
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
CGI_10022123
T166919_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ct
M06471_2.00
Drosophila melanogaster
YTRAAC
GTTYAR
B1H
Mathelier et al.(2014)
MA0218.1
0.719
0.719
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC41572
CUT
540
617
NSQGIDTSLVAKTVRELLSIHNIGQRLFAKHVLGLSQGTVSELLSKPKSWDKLTEKGRESYRKMYAWATDERNIMALK
EKC41572
CUT
929
1008
KYSNINTDDLVKQVKETLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMQIFLEDTEAIPKLVAS
EKC41572
CUT
1104
1184
MTSEIDTLELTSRVKDVLQFHNLGQKLFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIKMHLWLSDPHNVERLKHYQ
EKC41572
Homeodomain
1209
1265
KRPRVFFTEEQKDKLRMAYNQDPYPNQNTIEALANELNVGVKTVINWFHNHRMRAKQ
Links
Other
CUT,Homeodomain
family TFs
Other
Crassostrea gigas
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP13610
Atta cephalotes
ACEP13610
I
0.744
GB55715
Apis mellifera
GB55715
I
0.740
NV11750
Nasonia vitripennis
NV11750
I
0.736
LDEC001901
Leptinotarsa decemlineata
LDEC001901
I
0.736
Cflo_05239--XP_623857.2_APIME
Camponotus floridanus
Cflo_05239--XP_623857.2_APIME
I
0.729
Hsal_01674--XP_623857.2_APIME
Harpegnathos saltator
Hsal_01674--XP_623857.2_APIME
I
0.729
AAEL007605
Aedes aegypti
AAEL007605
I
0.727
AGAP001187
Anopheles gambiae
AGAP001187
I
0.726
GK16157
Drosophila willistoni
FBgn0218159
I
0.725
TC015699
Tribolium castaneum
TC015699
I
0.723
GA23816
Drosophila pseudoobscura
FBgn0245215
I
0.722
GH11890
Drosophila grimshawi
FBgn0119369
I
0.721
GF21154
Drosophila ananassae
FBgn0098157
I
0.719
GE15727
Drosophila yakuba
FBgn0233294
I
0.719
ct
Drosophila melanogaster
FBgn0004198
D
0.719
GG19652
Drosophila erecta
FBgn0111854
I
0.719
GL14717
Drosophila persimilis
FBgn0152321
I
0.719
GM17531
Drosophila sechellia
FBgn0172439
I
0.719
GD16852
Drosophila simulans
FBgn0188436
I
0.719
GJ19212
Drosophila virilis
FBgn0206357
I
0.719
CPIJ014526
Culex quinquefasciatus
CPIJ014526
I
0.716
CpipJ_CPIJ014526
Culex pipiens
CpipJ_CPIJ014526
I
0.716
SMAR001184
Strigamia maritima
SMAR001184
I
0.716
ACYPI003171
Acyrthosiphon pisum
ACYPI003171
I
0.714
MDOA010660
Musca domestica
MDOA010660
I
0.713
L798_01119
Zootermopsis nevadensis
L798_01119
I
0.712
ISCW022880
Ixodes scapularis
ISCW022880
I
0.709
CLEC005286
Cimex lectularius
CLEC005286
I
0.709
HHAL001955-PA
Halyomorpha halys
HHAL001955-PA
I
0.706