CJA03729 (Caenorhabditis japonica)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
CJA03729 T166920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.713 0.713
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.713 0.713
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA03729a CUT 193 271
CJA03729a Homeodomain 308 364
CJA03729b CUT 194 272
CJA03729b Homeodomain 309 365

Links

Other CUT,Homeodomain family TFs
Other Caenorhabditis japonica TFs

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102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action